Coexpression cluster: Cluster_1 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006547 histidine metabolic process 7.23% (6/83) 4.99 0.0 0.0
GO:0000105 histidine biosynthetic process 7.23% (6/83) 4.99 0.0 0.0
GO:0008652 cellular amino acid biosynthetic process 10.84% (9/83) 4.07 0.0 0.0
GO:0016053 organic acid biosynthetic process 12.05% (10/83) 3.61 0.0 0.0
GO:0046394 carboxylic acid biosynthetic process 10.84% (9/83) 3.64 0.0 0.0
GO:0044283 small molecule biosynthetic process 13.25% (11/83) 2.9 0.0 4e-06
GO:0006082 organic acid metabolic process 13.25% (11/83) 2.32 7e-06 0.000229
GO:0019752 carboxylic acid metabolic process 12.05% (10/83) 2.27 2.8e-05 0.000604
GO:0043436 oxoacid metabolic process 12.05% (10/83) 2.27 2.8e-05 0.000604
GO:0006520 cellular amino acid metabolic process 10.84% (9/83) 2.46 2.4e-05 0.000652
GO:0019842 vitamin binding 7.23% (6/83) 2.99 6.9e-05 0.001377
GO:0030170 pyridoxal phosphate binding 6.02% (5/83) 3.22 0.000126 0.002116
GO:0070279 vitamin B6 binding 6.02% (5/83) 3.22 0.000126 0.002116
GO:0009058 biosynthetic process 19.28% (16/83) 1.45 0.000151 0.002363
GO:0055114 obsolete oxidation-reduction process 13.25% (11/83) 1.78 0.000265 0.003864
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 6.02% (5/83) 2.85 0.000472 0.006461
GO:0016491 oxidoreductase activity 13.25% (11/83) 1.67 0.000515 0.00664
GO:0044281 small molecule metabolic process 14.46% (12/83) 1.54 0.000636 0.007741
GO:0051287 NAD binding 4.82% (4/83) 3.18 0.000717 0.008267
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 6.02% (5/83) 2.67 0.000884 0.009681
GO:1901566 organonitrogen compound biosynthetic process 12.05% (10/83) 1.57 0.001598 0.01667
GO:0043648 dicarboxylic acid metabolic process 2.41% (2/83) 4.41 0.002875 0.028619
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_6 0.034 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_11 0.041 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_14 0.043 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_6 0.042 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_20 0.034 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_27 0.034 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_21 0.044 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_26 0.036 OrthoFinder Compare
Escherichia coli HCCA Cluster_2 0.035 OrthoFinder Compare
Escherichia coli HCCA Cluster_11 0.042 OrthoFinder Compare
Escherichia coli HCCA Cluster_28 0.028 OrthoFinder Compare
Escherichia coli HCCA Cluster_30 0.036 OrthoFinder Compare
Escherichia coli HCCA Cluster_32 0.071 OrthoFinder Compare
Escherichia coli HCCA Cluster_33 0.043 OrthoFinder Compare
Escherichia coli HCCA Cluster_37 0.085 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_3 0.061 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_9 0.04 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_8 0.053 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_2 0.039 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_9 0.034 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_11 0.124 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_22 0.036 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_6 0.073 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_7 0.029 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_10 0.037 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_15 0.041 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_18 0.03 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_24 0.032 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_29 0.042 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_30 0.032 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_35 0.028 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_8 0.034 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_22 0.029 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_35 0.038 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_38 0.04 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_53 0.031 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_61 0.03 OrthoFinder Compare
Salmonella enterica HCCA Cluster_10 0.1 OrthoFinder Compare
Salmonella enterica HCCA Cluster_15 0.032 OrthoFinder Compare
Salmonella enterica HCCA Cluster_39 0.154 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_6 0.03 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_7 0.033 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_2 0.031 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_2 0.029 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_5 0.062 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_25 0.028 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_28 0.038 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_37 0.033 OrthoFinder Compare
Sequences (83) (download table)

InterPro Domains

GO Terms

Family Terms