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  5. CPC43926

CPC43926 (oppB_2, ERS093114_00443)


Aliases : oppB_2, ERS093114_00443

Description : peptide ABC transporter permease [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000034 (OrthoFinder) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC43926
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AAC73918 gsiC, b0831 glutathione ABC transporter permease [Ensembl].... 0.05 OrthoFinder
AAC74326 oppB, b1244 oligopeptide ABC transporter permease [Ensembl].... 0.11 OrthoFinder
AAC74375 sapB, b1293 antimicrobial peptide transport ABC transporter permease... 0.1 OrthoFinder
AAC76502 nikB, b3477 nickel ABC transporter permease [Ensembl].... 0.05 OrthoFinder
AAC76568 dppB, b3543 dipeptide/heme ABC transporter permease [Ensembl].... 0.07 OrthoFinder
AAL00509 spr1706, amiC ABC transporter membrane-spanning permease-oligopeptide... 0.03 OrthoFinder
AAL19786 STM0850, yliC putative ABC transporter periplasmic binding protein... 0.02 OrthoFinder
AAL20182 STM1256 putative ABC transporter [Ensembl].... 0.03 OrthoFinder
AAL20610 STM1693, sapB ABC superfamily peptide transport protein [Ensembl].... 0.03 OrthoFinder
AAL20663 STM1745, oppB oligopeptide transport protein [Ensembl].... 0.04 OrthoFinder
AAL22490 STM3629, dppB dipeptide transport protein 1 [Ensembl].... 0.05 OrthoFinder
AEA93323 opp1B, OG1RF_10636 oligopeptide ABC superfamily ATP binding cassette... 0.03 OrthoFinder
AEA95055 opp2B, OG1RF_12368 oligopeptide ABC superfamily ATP binding cassette... 0.06 OrthoFinder
AGT22074 N559_0252, DppB dipeptide transporter permease DppB [Ensembl].... 0.03 OrthoFinder
AGT22122 N559_0303, NikB nickel transporter permease NikB [Ensembl].... 0.02 OrthoFinder
AGT23464 N559_1722, DppB putative dipeptide ABC transporter, permease protein... 0.03 OrthoFinder
AGT23803 N559_2085 oligopeptide transporter permease [Ensembl].... 0.02 OrthoFinder
AGT24128 N559_2435 peptide ABC transporter membrane protein [Ensembl].... 0.06 OrthoFinder
AGT25118 N559_3467 peptide ABC transporter membrane protein [Ensembl].... 0.05 OrthoFinder
AGT25384 N559_3746 putative ABC transport system permease component... 0.04 OrthoFinder
AKI48108 L2625_00135 oligopeptide ABC transporter, permease protein... 0.07 OrthoFinder
AKI50193 oppB, L2625_02359 oligopeptide ABC transporter, permease protein... 0.03 OrthoFinder
CBI65786 oppB, HPB8_229 peptide/nickel transport system permease protein... 0.03 OrthoFinder
CBI66820 dppB, HPB8_1263 dipeptide ABC transporter, permease protein (DppB)... 0.08 OrthoFinder
CCG26341 OppB Oligopeptide transport system permease protein OppB (TC... 0.03 OrthoFinder
CCP44039 oppB, Rv1283c Probable oligopeptide-transport integral membrane... 0.03 OrthoFinder
CPC32208 nikB, ERS093114_00035 nickel transport system permease protein [Ensembl].... 0.03 OrthoFinder
CPC43653 oppB_1, ERS093114_00435 Oligopeptide transport system permease protein oppB... 0.02 OrthoFinder
CPC72096 opp-3B, ERS093114_01158 oligopeptide permease%2C channel-forming protein... 0.05 OrthoFinder
CPD17797 opp-1B, ERS093114_02217 Oligopeptide transporter putative membrane permease... 0.04 OrthoFinder
CRO32970 gsiC Glutathione transport system permease protein GsiC... 0.02 OrthoFinder
CRO37911 yejB_2 Inner membrane ABC transporter permease protein YejB... 0.03 OrthoFinder
CRP12152 dppB Dipeptide transport system permease protein DppB... 0.12 OrthoFinder
EDJ90656 CGSHi22421_04083 dipeptide transport system permease protein [Ensembl].... 0.02 OrthoFinder
EDJ90883 CGSHi22421_03503 peptide ABC transporter permease protein [Ensembl].... 0.02 OrthoFinder
EDJ91926 CGSHi22421_09223 oligopeptide permease ABC transporter membrane component... 0.04 OrthoFinder
KNA51872 VCV51_030402 binding-protein-dependent transport system inner... 0.06 OrthoFinder
KNA54678 VCV51_030764 binding-protein-dependent transport system inner... 0.03 OrthoFinder
KNA58586 VCV51_031121 binding-protein-dependent transport system inner... 0.02 OrthoFinder
KNA60555 VCV51_032226 binding-protein-dependent transport system inner... 0.05 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0005283 amino acid:sodium symporter activity IEP Enrichment
MF GO:0005342 organic acid transmembrane transporter activity IEP Enrichment
MF GO:0005343 organic acid:sodium symporter activity IEP Enrichment
MF GO:0005416 amino acid:cation symporter activity IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006814 sodium ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015171 amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
MF GO:0015655 alanine:sodium symporter activity IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015804 neutral amino acid transport IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0022858 alanine transmembrane transporter activity IEP Enrichment
BP GO:0032328 alanine transport IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 111 302
No external refs found!