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  5. CCL19204

CCL19204 (BN171_2950006)


Aliases : BN171_2950006

Description : Transcriptional regulator, LysR family [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL19204
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AEA93759 OG1RF_11072 transcriptional regulator [Ensembl]. LysR substrate... 0.04 OrthoFinder
AEA93760 OG1RF_11073 LysR family transcriptional regulator [Ensembl]. LysR... 0.04 OrthoFinder
AGT23447 N559_1705 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
CPC51762 oxyR, ERS093114_00680 hydrogen peroxide-inducible genes activator [Ensembl].... 0.05 OrthoFinder
CRO86371 oxyR_2 Morphology and auto-aggregation control protein... 0.02 OrthoFinder
KNA59752 VCV51_032447 lysR family Bacterial regulatory helix-turn-helix... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003919 FMN adenylyltransferase activity IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Enrichment
MF GO:0004788 thiamine diphosphokinase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006012 galactose metabolic process IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
MF GO:0008531 riboflavin kinase activity IEP Enrichment
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0042357 thiamine diphosphate metabolic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
InterPro domains Description Start Stop
IPR000847 Tscrpt_reg_HTH_LysR 5 62
IPR005119 LysR_subst-bd 90 284
UniProtKB U3X209