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CPC50414 (queE, ERS093114_00642)


Aliases : queE, ERS093114_00642

Description : Queuosine Biosynthesis QueE Radical SAM [Ensembl]. Radical SAM superfamily, 4Fe-4S single cluster domain [Interproscan].


Gene families : OG_02_0001244 (OrthoFinder) Phylogenetic Tree(s): OG0001244_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC50414
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AKP15450 queE, WX61_01403 7-carboxy-7-deazaguanine synthase [Ensembl]. Radical SAM... 0.02 OrthoFinder
KNA55687 VCV51_031000, QueE queuosine biosynthesis protein QueE [Ensembl]. Radical... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR007197 rSAM 28 123
No external refs found!