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Aliases : BN171_3020018
Description : Transcriptional regulator, GntR family [Ensembl]. FCD domain, Bacterial regulatory proteins [Interproscan].
Gene families : OG_02_0000074 (OrthoFinder) Phylogenetic Tree(s): OG0000074_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CCL19306 | |
| Cluster | HCCA: Cluster_41 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC74532 | mcbR, b1450 | colanic acid and biofilm gene transcriptional regulator,... | 0.05 | OrthoFinder | |
| AAL22227 | STM3358 | putative gntR family regulatory protein [Ensembl].... | 0.03 | OrthoFinder | |
| CRO53154 | No alias | transcriptional regulator NanR [Ensembl]. FCD domain,... | 0.03 | OrthoFinder | |
| CRP54166 | No alias | colanic acid/biofilm transcriptional regulator... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004527 | exonuclease activity | IEP | Enrichment |
| MF | GO:0004529 | exodeoxyribonuclease activity | IEP | Enrichment |
| MF | GO:0004536 | deoxyribonuclease activity | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006270 | DNA replication initiation | IEP | Enrichment |
| BP | GO:0006275 | regulation of DNA replication | IEP | Enrichment |
| BP | GO:0006308 | DNA catabolic process | IEP | Enrichment |
| BP | GO:0007154 | cell communication | IEP | Enrichment |
| BP | GO:0007267 | cell-cell signaling | IEP | Enrichment |
| MF | GO:0008855 | exodeoxyribonuclease VII activity | IEP | Enrichment |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0009372 | quorum sensing | IEP | Enrichment |
| BP | GO:0009405 | obsolete pathogenesis | IEP | Enrichment |
| BP | GO:0009595 | detection of biotic stimulus | IEP | Enrichment |
| BP | GO:0009607 | response to biotic stimulus | IEP | Enrichment |
| CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
| MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0016895 | exodeoxyribonuclease activity, producing 5'-phosphomonoesters | IEP | Enrichment |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Enrichment |
| BP | GO:0023052 | signaling | IEP | Enrichment |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Enrichment |
| BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Enrichment |
| BP | GO:0044764 | multi-organism cellular process | IEP | Enrichment |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Enrichment |
| BP | GO:0051606 | detection of stimulus | IEP | Enrichment |
| BP | GO:0051704 | multi-organism process | IEP | Enrichment |
| BP | GO:0060245 | detection of cell density | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Enrichment |
| UniProtKB | U3WZ11 |