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  5. CPC95740

CPC95740 (gsiD_2, ERS093114_01724)


Aliases : gsiD_2, ERS093114_01724

Description : Oligopeptide transport system permease protein [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000041 (OrthoFinder) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC95740
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AAC73919 gsiD, b0832 glutathione ABC transporter permease [Ensembl].... 0.01 OrthoFinder
AAC74327 oppC, b1245 oligopeptide ABC transporter permease [Ensembl].... 0.04 OrthoFinder
AAC74374 sapC, b1292 antimicrobial peptide transport ABC transporter permease... 0.02 OrthoFinder
AAC74558 ddpC, b1485 D,D-dipeptide ABC transporter permease [Ensembl].... 0.01 OrthoFinder
AAC76567 dppC, b3542 dipeptide/heme ABC transporter permease [Ensembl].... 0.02 OrthoFinder
AAK99995 spr1192, appC ABC transporter membrane-spanning permease-oligopeptide... 0.03 OrthoFinder
AAL19787 STM0851, yliD putative ABC transporter inner membrane component... 0.03 OrthoFinder
AAL20183 STM1257 putative ABC transporter [Ensembl].... 0.02 OrthoFinder
AAL22489 STM3628, dppC dipeptide transport protein 2 [Ensembl]. N-terminal TM... 0.03 OrthoFinder
AGT22075 N559_0253 dipeptide transporter [Ensembl]. N-terminal TM domain of... 0.03 OrthoFinder
AGT23804 N559_2086 oligopeptide transport permease protein [Ensembl].... 0.03 OrthoFinder
AGT23970 N559_2267 oligopeptide ABC transport system permease component... 0.04 OrthoFinder
AGT24127 N559_2434 putative ABC transport system permease protein... 0.04 OrthoFinder
AGT24649 N559_2985 peptide transport permease protein [Ensembl]. N-terminal... 0.02 OrthoFinder
AGT25385 N559_3747 putative ABC transport system permease protein... 0.04 OrthoFinder
AKI48109 L2625_00136 oligopeptide ABC transporter, permease protein... 0.02 OrthoFinder
CCG26342 OppC Oligopeptide transport system permease protein OppC (TC... 0.03 OrthoFinder
CCL17023 oppC, BN171_1090004 ABC-type transport system, oligopeptide-family permease... 0.04 OrthoFinder
CRP12184 dppC Dipeptide transport system permease protein DppC... 0.02 OrthoFinder
EDJ91925 oppD, CGSHi22421_09218 oligopeptide transporter ATP-binding component... 0.02 OrthoFinder
KNA51871 VCV51_030401 binding-protein-dependent transport system inner... 0.03 OrthoFinder
KNA58585 VCV51_031122 binding-protein-dependent transport system inner... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004358 glutamate N-acetyltransferase activity IEP Enrichment
MF GO:0005381 iron ion transmembrane transporter activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0015093 ferrous iron transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0033573 high-affinity iron permease complex IEP Enrichment
BP GO:0034755 iron ion transmembrane transport IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1905862 ferroxidase complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 205 386
No external refs found!