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  5. CPC95781

CPC95781 (gsiC, ERS093114_01725)


Aliases : gsiC, ERS093114_01725

Description : Oligopeptide transport system permease protein [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000034 (OrthoFinder) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC95781
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AAC74326 oppB, b1244 oligopeptide ABC transporter permease [Ensembl].... 0.04 OrthoFinder
AAC74375 sapB, b1293 antimicrobial peptide transport ABC transporter permease... 0.02 OrthoFinder
AAC75239 yejB, b2178 microcin C ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAC76568 dppB, b3543 dipeptide/heme ABC transporter permease [Ensembl].... 0.04 OrthoFinder
AAL00509 spr1706, amiC ABC transporter membrane-spanning permease-oligopeptide... 0.03 OrthoFinder
AAL22490 STM3629, dppB dipeptide transport protein 1 [Ensembl].... 0.03 OrthoFinder
AGT22074 N559_0252, DppB dipeptide transporter permease DppB [Ensembl].... 0.03 OrthoFinder
AGT23464 N559_1722, DppB putative dipeptide ABC transporter, permease protein... 0.03 OrthoFinder
AGT24128 N559_2435 peptide ABC transporter membrane protein [Ensembl].... 0.03 OrthoFinder
AGT25118 N559_3467 peptide ABC transporter membrane protein [Ensembl].... 0.02 OrthoFinder
AGT25384 N559_3746 putative ABC transport system permease component... 0.04 OrthoFinder
CBI66820 dppB, HPB8_1263 dipeptide ABC transporter, permease protein (DppB)... 0.02 OrthoFinder
CCL17022 oppB, BN171_1090003 ABC-type transport system, oligopeptide-family permease... 0.04 OrthoFinder
CRP12152 dppB Dipeptide transport system permease protein DppB... 0.02 OrthoFinder
EDJ91926 CGSHi22421_09223 oligopeptide permease ABC transporter membrane component... 0.02 OrthoFinder
KNA51872 VCV51_030402 binding-protein-dependent transport system inner... 0.03 OrthoFinder
KNA58586 VCV51_031121 binding-protein-dependent transport system inner... 0.03 OrthoFinder
KNA60922 VCV51_031896 binding-protein-dependent transport system inner... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004358 glutamate N-acetyltransferase activity IEP Enrichment
MF GO:0005381 iron ion transmembrane transporter activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0015093 ferrous iron transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0033573 high-affinity iron permease complex IEP Enrichment
BP GO:0034755 iron ion transmembrane transport IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1905862 ferroxidase complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 278 469
No external refs found!