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  5. CPC99917

CPC99917 (btr, ERS093114_01825)


Aliases : btr, ERS093114_01825

Description : AraC family transcriptional regulator [Ensembl]. Helix-turn-helix domain [Interproscan].


Gene families : OG_02_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC99917

Target Alias Description ECC score Gene Family Method Actions
AAC77349 rob, b4396 right oriC-binding transcriptional activator, AraC... 0.03 OrthoFinder
AAL19317 STM0363 putative transcription regulator, AraC family [Ensembl].... 0.03 OrthoFinder
AAL23401 STM4586, rob transcriptional regulator [Ensembl]. Helix-turn-helix... 0.03 OrthoFinder
AEA92906 OG1RF_10219 methylphosphotriester-DNA alkyltransferase [Ensembl].... 0.03 OrthoFinder
AEA94354 OG1RF_11667 AraC family transcriptional regulator [Ensembl].... 0.03 OrthoFinder
AGT24051 N559_2350 putative AraC-type trancriptional regulator [Ensembl].... 0.02 OrthoFinder
AGT24370 N559_2694, MarA DNA-binding transcriptional activator MarA [Ensembl].... 0.04 OrthoFinder
AKI48081 L2625_00107 transcriptional regulator, AraC family [Ensembl].... 0.03 OrthoFinder
AKI49077 pocR, L2625_01162 propanediol utilization: transcriptional regulatior... 0.03 OrthoFinder
CCL17275 BN171_1430002 Transcriptional regulator, AraC family [Ensembl].... 0.03 OrthoFinder
CCL19647 BN171_3340014 Transcriptional regulator, AraC family [Ensembl].... 0.03 OrthoFinder
CCL19921 BN171_360015 Transcriptional regulator, AraC family [Ensembl].... 0.04 OrthoFinder
CRO34188 rhaS_1 L-rhamnose operon regulatory protein RhaS [Ensembl].... 0.03 OrthoFinder
KNA47918 VCV51_033866 AraC family Bacterial regulatory helix-turn-helix... 0.03 OrthoFinder
KNA58949 VCV51_031249 AraC family Bacterial regulatory helix-turn-helix... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005381 iron ion transmembrane transporter activity IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0033573 high-affinity iron permease complex IEP Enrichment
BP GO:0034755 iron ion transmembrane transport IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1905862 ferroxidase complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR018060 HTH_AraC 177 254
No external refs found!