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  5. CPD19910

CPD19910 (tcyB, ERS093114_02272)


Aliases : tcyB, ERS093114_02272

Description : cystine transport system permease protein [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000016 (OrthoFinder) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPD19910
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AAC73754 gltK, b0653 glutamate/aspartate ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAC73949 artQ, b0862 arginine ABC transporter permease [Ensembl].... 0.07 OrthoFinder
AAC74985 tcyL, b1918 ABC family putative inner membrane permease [Ensembl].... 0.05 OrthoFinder
AAL19614 STM0663, gltK glutamate/aspartate transporter [Ensembl].... 0.05 OrthoFinder
AAL19765 STM0829, glnP glutamine high-affinity transporter [Ensembl].... 0.05 OrthoFinder
AAL19824 STM0889, artQ arginine 3rd transport system [Ensembl].... 0.08 OrthoFinder
AAL20864 STM1952, yecS putative ABC-type amino acid transporter [Ensembl].... 0.04 OrthoFinder
AEA92878 OG1RF_10191 amino acid ABC superfamily ATP binding cassette... 0.03 OrthoFinder
AEA93226 OG1RF_10539 amino acid ABC superfamily ATP binding cassette... 0.04 OrthoFinder
AEA93582 OG1RF_10895 glutamine ABC superfamily ATP binding cassette... 0.05 OrthoFinder
AEA93583 OG1RF_10896 amino acid ABC superfamily ATP binding cassette... 0.05 OrthoFinder
AGT23576 N559_1843 amino acid ABC transporter membrane protein [Ensembl].... 0.04 OrthoFinder
AGT23904 N559_2192 amino acid ABC transporter [Ensembl]. transmembrane... 0.03 OrthoFinder
AGT24089 N559_2392 ABC transporter, permease protein [Ensembl].... 0.08 OrthoFinder
AGT24219 N559_2537 glutamine ABC transporter permease component [Ensembl].... 0.04 OrthoFinder
AGT25038 N559_3385, ArtQ arginine transporter permease subunit ArtQ [Ensembl].... 0.02 OrthoFinder
AGT25284 N559_3642 glutamate/aspartate ABC superfamily ATP binding cassette... 0.06 OrthoFinder
AGT25743 N559_4117 glutamate/aspartate transport system inner membrane... 0.07 OrthoFinder
AGT25744 N559_4118 amino acid ABC transporter membrane protein [Ensembl].... 0.04 OrthoFinder
AKI49734 L2625_01875 amino acid ABC transporter, permease protein [Ensembl].... 0.03 OrthoFinder
AKI50281 L2625_02449 polar amino acid ABC transporter, permease protein... 0.04 OrthoFinder
AKI50282 L2625_02450 polar amino acid ABC transporter, permease protein... 0.04 OrthoFinder
CBI66166 yckJ, HPB8_609 putative polar amino acid transport system permease... 0.02 OrthoFinder
CCG26411 No alias ABC transporter membrane-spanning permease-glutamine... 0.03 OrthoFinder
CCG26871 No alias ABC transporter membrane-spanning permease-glutamine... 0.04 OrthoFinder
CCL16928 BN171_1000002 ABC-type transport system, aminoacid-family permease... 0.05 OrthoFinder
CCL18017 BN171_2030003 ABC-type transport system, aminoacid-family permease... 0.03 OrthoFinder
CCL18563 BN171_2440004 ABC-type transport system,cystine/aminoacid-family... 0.07 OrthoFinder
CCL18564 BN171_2440005 ABC-type transport system,cystine/aminoacid-family... 0.06 OrthoFinder
CRO59374 glnM_3 putative glutamine ABC transporter permease protein GlnM... 0.05 OrthoFinder
CRO59397 yhdY Inner membrane amino-acid ABC transporter permease... 0.05 OrthoFinder
EDJ90647 CGSHi22421_04038 arginine ABC transporter permease protein [Ensembl].... 0.02 OrthoFinder
EDJ91874 CGSHi22421_08963 ABC-type amino acid transport system permease component... 0.04 OrthoFinder
KNA53744 VCV51_033270 His/Glu/Gln/Arg/opine family amino ABC transporter... 0.03 OrthoFinder
KNA58918 VCV51_031257 His/Glu/Gln/Arg/opine family amino ABC transporter... 0.04 OrthoFinder
KNA59811 VCV51_030871 binding-protein-dependent transport system inner... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0005310 dicarboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
BP GO:0006857 oligopeptide transport IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0015558 secondary active p-aminobenzoyl-glutamate transmembrane transporter activity IEP Enrichment
BP GO:0015814 p-aminobenzoyl-glutamate transport IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0035442 dipeptide transmembrane transport IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0035672 oligopeptide transmembrane transport IEP Enrichment
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
BP GO:0042938 dipeptide transport IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
MF GO:0071916 dipeptide transmembrane transporter activity IEP Enrichment
BP GO:0072337 modified amino acid transport IEP Enrichment
MF GO:0072349 modified amino acid transmembrane transporter activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1902604 p-aminobenzoyl-glutamate transmembrane transport IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
MF GO:1904680 peptide transmembrane transporter activity IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 42 231
No external refs found!