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  5. CPD24869

CPD24869 (rpmE2, ERS093114_02385)


Aliases : rpmE2, ERS093114_02385

Description : 50S ribosomal protein L31 type B [Ensembl]. Ribosomal protein L31 [Interproscan].


Gene families : OG_02_0000170 (OrthoFinder) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPD24869
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AAC76918 rpmE, b3936 50S ribosomal subunit protein L31 [Ensembl]. Ribosomal... 0.12 OrthoFinder
AAK99980 spr1177, rpmE 50S ribosomal protein L31 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
AAL22936 STM4096, rpmE 50S ribosomal subunit protein L31 [Ensembl]. Ribosomal... 0.14 OrthoFinder
AEA93635 rpmE, OG1RF_10948 50S ribosomal protein L31 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
AHY39427 rpmE, CJ8421_00790 50S ribosomal protein L31 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
AKI50478 rpmE, L2625_02668 ribosomal protein L31 [Ensembl]. Ribosomal protein L31... 0.07 OrthoFinder
AKP15272 rpmE, WX61_01223 50S ribosomal protein L31 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
CCG27118 No alias LSU ribosomal protein L31p [Ensembl]. Ribosomal protein... 0.13 OrthoFinder
CCL19956 rpmE, BN171_3600034 50S ribosomal protein L31 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
CCP44055 rpmE, Rv1298 50S ribosomal protein L31 RpmE [Ensembl]. Ribosomal... 0.03 OrthoFinder
CRO57592 rpmE 50S ribosomal protein L31 [Ensembl]. Ribosomal protein... 0.14 OrthoFinder
EDJ91333 CGSHi22421_04498 50S ribosomal protein L31 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
KNA54898 VCV51_031796 ribosomal protein L31 [Ensembl]. Ribosomal protein L31... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0050380 undecaprenyl-diphosphatase activity IEP Enrichment
InterPro domains Description Start Stop
IPR002150 Ribosomal_L31 1 79
No external refs found!