Coexpression cluster: Cluster_3 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044271 cellular nitrogen compound biosynthetic process 19.05% (12/63) 2.39 2e-06 0.000306
GO:0043043 peptide biosynthetic process 12.7% (8/63) 2.9 7e-06 0.000356
GO:0006518 peptide metabolic process 12.7% (8/63) 2.9 7e-06 0.000356
GO:0043604 amide biosynthetic process 12.7% (8/63) 2.8 1.2e-05 0.000472
GO:1901566 organonitrogen compound biosynthetic process 19.05% (12/63) 2.23 5e-06 0.000496
GO:0043603 cellular amide metabolic process 12.7% (8/63) 2.74 1.6e-05 0.000539
GO:0003735 structural constituent of ribosome 11.11% (7/63) 2.8 4.4e-05 0.000967
GO:0005198 structural molecule activity 11.11% (7/63) 2.8 4.4e-05 0.000967
GO:0006412 translation 11.11% (7/63) 2.84 3.8e-05 0.001055
GO:0044267 cellular protein metabolic process 11.11% (7/63) 2.55 0.000141 0.002309
GO:1901564 organonitrogen compound metabolic process 22.22% (14/63) 1.56 0.000167 0.002348
GO:0034641 cellular nitrogen compound metabolic process 23.81% (15/63) 1.51 0.000133 0.002379
GO:0034645 cellular macromolecule biosynthetic process 12.7% (8/63) 2.3 0.000161 0.002438
GO:0072522 purine-containing compound biosynthetic process 6.35% (4/63) 3.8 0.000127 0.002497
GO:0009059 macromolecule biosynthetic process 12.7% (8/63) 2.22 0.000242 0.003173
GO:0044249 cellular biosynthetic process 19.05% (12/63) 1.67 0.000259 0.003189
GO:0005840 ribosome 9.52% (6/63) 2.62 0.000341 0.003536
GO:1901576 organic substance biosynthetic process 19.05% (12/63) 1.63 0.000328 0.00359
GO:0009058 biosynthetic process 20.63% (13/63) 1.55 0.000319 0.003693
GO:0043226 organelle 9.52% (6/63) 2.51 0.000506 0.004336
GO:0043232 intracellular non-membrane-bounded organelle 9.52% (6/63) 2.51 0.000506 0.004336
GO:0043229 intracellular organelle 9.52% (6/63) 2.51 0.000506 0.004336
GO:0043228 non-membrane-bounded organelle 9.52% (6/63) 2.51 0.000506 0.004336
GO:0006807 nitrogen compound metabolic process 25.4% (16/63) 1.16 0.00125 0.010257
GO:0072521 purine-containing compound metabolic process 6.35% (4/63) 3.0 0.001304 0.010273
GO:0044237 cellular metabolic process 26.98% (17/63) 1.1 0.001447 0.010962
GO:0019538 protein metabolic process 11.11% (7/63) 1.97 0.001747 0.012748
GO:0006164 purine nucleotide biosynthetic process 4.76% (3/63) 3.51 0.001869 0.013148
GO:0044238 primary metabolic process 25.4% (16/63) 1.09 0.002187 0.014855
GO:0044260 cellular macromolecule metabolic process 14.29% (9/63) 1.55 0.003022 0.019845
GO:0016742 hydroxymethyl-, formyl- and related transferase activity 3.17% (2/63) 4.39 0.003266 0.020106
GO:0055086 nucleobase-containing small molecule metabolic process 7.94% (5/63) 2.28 0.003165 0.020115
GO:0009165 nucleotide biosynthetic process 4.76% (3/63) 3.07 0.004813 0.027887
GO:1901293 nucleoside phosphate biosynthetic process 4.76% (3/63) 3.07 0.004813 0.027887
GO:0071704 organic substance metabolic process 26.98% (17/63) 0.91 0.006038 0.033985
GO:0008152 metabolic process 28.57% (18/63) 0.82 0.008674 0.047466
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_12 0.047 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_14 0.062 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_15 0.075 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_18 0.05 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_25 0.028 OrthoFinder Compare
Escherichia coli HCCA Cluster_18 0.03 OrthoFinder Compare
Escherichia coli HCCA Cluster_24 0.089 OrthoFinder Compare
Escherichia coli HCCA Cluster_38 0.055 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_5 0.052 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_40 0.052 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_4 0.027 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_10 0.079 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_18 0.029 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_51 0.036 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_61 0.035 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_63 0.04 OrthoFinder Compare
Salmonella enterica HCCA Cluster_31 0.037 OrthoFinder Compare
Salmonella enterica HCCA Cluster_44 0.027 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_18 0.056 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_10 0.08 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_17 0.038 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_1 0.049 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_12 0.035 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_14 0.062 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_19 0.068 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_24 0.029 OrthoFinder Compare
Sequences (63) (download table)

InterPro Domains

GO Terms

Family Terms