CCL19451 (BN171_3150014)

Aliases : BN171_3150014

Description : Transcription antiterminator, PTS operon regulator [Ensembl]. Phosphoenolpyruvate-dependent sugar phosphotransferase system, PRD domain, HTH domain, Mga helix-turn-helix domain [Interproscan].

Gene families : OG_02_0000208 (OrthoFinder) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CCL19451
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AAL23268	STM4448	putative phosphotransferase system...	0.03	OrthoFinder
AKI48362	L2625_00417	transcriptional antiterminator [Ensembl]. PTS EIIA...	0.04	OrthoFinder
AKI48384	L2625_00440	transcriptional antiterminator [Ensembl]. PRD domain,...	0.04	OrthoFinder
AKI50136	L2625_02299	transcriptional antiterminator, putative [Ensembl]....	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	Enrichment
MF	GO:0004359	glutaminase activity	IEP	Enrichment
BP	GO:0009267	cellular response to starvation	IEP	Enrichment
BP	GO:0009605	response to external stimulus	IEP	Enrichment
BP	GO:0009991	response to extracellular stimulus	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Enrichment
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Enrichment
MF	GO:0016987	sigma factor activity	IEP	Enrichment
BP	GO:0031667	response to nutrient levels	IEP	Enrichment
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Enrichment
BP	GO:0031669	cellular response to nutrient levels	IEP	Enrichment
BP	GO:0042594	response to starvation	IEP	Enrichment
BP	GO:0071496	cellular response to external stimulus	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011608	PRD	208	293
IPR011608	PRD	329	406
IPR013196	HTH_11	92	149
IPR002178	PTS_EIIA_type-2_dom	516	649
IPR007737	Mga_HTH	8	63

External Links

UniProtKB	U3WZG3

CCL19451 (BN171_3150014)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation