- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : spr0660, livH
Description : ABC transporter membrane-spanning permease-branched chain amino acid transport [Ensembl]. Branched-chain amino acid transport system / permease component [Interproscan].
Gene families : OG_02_0001161 (OrthoFinder) Phylogenetic Tree(s): OG0001161_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAK99464 | |
| Cluster | HCCA: Cluster_8 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC76482 | livH, b3457 | branched-chain amino acid ABC transporter permease... | 0.06 | OrthoFinder | |
| AAL22423 | STM3563, livH | high-affinity branched-chain amino acid transporter... | 0.04 | OrthoFinder | |
| AGT22153 | N559_0335, LivH | branched-chain amino acid transporter permease subunit... | 0.03 | OrthoFinder | |
| CRO53335 | livH_2 | LIV-I protein H [Ensembl]. Branched-chain amino acid... | 0.02 | OrthoFinder | |
| CRP80395 | livH_3 | LIV-I protein H [Ensembl]. Branched-chain amino acid... | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016021 | integral component of membrane | IEA | Interproscan |
| MF | GO:0022857 | transmembrane transporter activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0004455 | ketol-acid reductoisomerase activity | IEP | Enrichment |
| MF | GO:0005436 | sodium:phosphate symporter activity | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| BP | GO:0006817 | phosphate ion transport | IEP | Enrichment |
| BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | Enrichment |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015293 | symporter activity | IEP | Enrichment |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0044341 | sodium-dependent phosphate transport | IEP | Enrichment |
| BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001851 | ABC_transp_permease | 5 | 273 |
| No external refs found! |