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  5. AAK99568

AAK99568 (spr0764, rpsA)


Aliases : spr0764, rpsA

Description : 30S Ribosomal protein S1 [Ensembl]. S1 RNA binding domain [Interproscan].


Gene families : OG_02_0000539 (OrthoFinder) Phylogenetic Tree(s): OG0000539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAK99568
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AAC73997 rpsA, b0911 30S ribosomal subunit protein S1 [Ensembl]. S1 RNA... 0.14 OrthoFinder
AAL19915 STM0981, rpsA 30S ribosomal subunit protein S1 [Ensembl]. S1 RNA... 0.16 OrthoFinder
AGT24996 N559_3340 30S ribosomal protein S1 [Ensembl]. S1 RNA binding... 0.05 OrthoFinder
AKP14185 rpsA, WX61_00096 30S ribosomal protein S1 [Ensembl]. S1 RNA binding... 0.03 OrthoFinder
CBI66007 rpsA, HPB8_450 small subunit ribosomal protein S1 [Ensembl]. S1 RNA... 0.06 OrthoFinder
CCG26736 No alias SSU ribosomal protein S1p [Ensembl]. S1 RNA binding... 0.11 OrthoFinder
CCP44394 rpsA, Rv1630 30S ribosomal protein S1 RpsA [Ensembl]. S1 RNA binding... 0.08 OrthoFinder
CRO41659 rpsA 30S ribosomal protein S1 [Ensembl]. S1 RNA binding... 0.12 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003029 S1_domain 275 348
IPR003029 S1_domain 106 173
IPR003029 S1_domain 14 74
IPR003029 S1_domain 190 262
No external refs found!