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  5. AAK99617

AAK99617 (spr0813, ABC-MSD)


Aliases : spr0813, ABC-MSD

Description : ABC transporter membrane-spanning permease-unknown substrate [Ensembl]. FtsX-like permease family [Interproscan].


Gene families : OG_02_0000663 (OrthoFinder) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAK99617
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AEA94343 OG1RF_11656 ABC superfamily ATP binding cassette transporter,... 0.01 OrthoFinder
AEA94800 OG1RF_12113 ABC superfamily ATP binding cassette transporter,... 0.01 OrthoFinder
AKI49740 L2625_01882 ABC transporter, permease protein [Ensembl]. ABC... 0.01 OrthoFinder
AKI50113 L2625_02271 ABC transporter, permease protein [Ensembl]. ABC... 0.03 OrthoFinder
CCL17735 BN171_1740010 ABC-type transport system, permease [Ensembl]. FtsX-like... 0.01 OrthoFinder
CCL17742 BN171_1750003 ABC-type transport system, permease protein [Ensembl].... 0.01 OrthoFinder
CCL19417 BN171_3110010 ABC-type transport system, permease [Ensembl]. FtsX-like... 0.04 OrthoFinder
CCL19489 BN171_3180013 ABC-type transport system, permease [Ensembl]. 0.02 OrthoFinder
CCL19641 BN171_3340008 Abc transporter, permease associated with salivaricin... 0.01 OrthoFinder
CCL20546 BN171_650001 ABC-type transport system, permease [Ensembl]. FtsX-like... 0.03 OrthoFinder
CPC66060 ERS093114_00988 ABC transporter permease protein [Ensembl]. FtsX-like... 0.01 OrthoFinder
CPC69061 ERS093114_01068 ABC transporter permease [Ensembl]. FtsX-like permease... 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003838 ABC3_permease_dom 87 181
No external refs found!