AAL00235 (spr1431, lytC)

Aliases : spr1431, lytC

Description : 1,4-beta-N-acetylmuramidase [Ensembl]. Glycosyl hydrolases family 25, Putative cell wall binding repeat [Interproscan].

Gene families : OG_02_0001179 (OrthoFinder) Phylogenetic Tree(s): OG0001179_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAL00235
Cluster	HCCA: Cluster_21

Type	GO Term	Name	Evidence	Source
BP	GO:0000270	peptidoglycan metabolic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003796	lysozyme activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006027	glycosaminoglycan catabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009253	peptidoglycan catabolic process	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0030203	glycosaminoglycan metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
MF	GO:0061783	peptidoglycan muralytic activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Enrichment
MF	GO:0003872	6-phosphofructokinase activity	IEP	Enrichment
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Enrichment
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Enrichment
MF	GO:0004814	arginine-tRNA ligase activity	IEP	Enrichment
MF	GO:0005216	ion channel activity	IEP	Enrichment
MF	GO:0005244	voltage-gated ion channel activity	IEP	Enrichment
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Enrichment
MF	GO:0005253	anion channel activity	IEP	Enrichment
MF	GO:0005254	chloride channel activity	IEP	Enrichment
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Enrichment
BP	GO:0006259	DNA metabolic process	IEP	Enrichment
BP	GO:0006304	DNA modification	IEP	Enrichment
BP	GO:0006420	arginyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006464	cellular protein modification process	IEP	Enrichment
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Enrichment
BP	GO:0006821	chloride transport	IEP	Enrichment
MF	GO:0008308	voltage-gated anion channel activity	IEP	Enrichment
MF	GO:0008443	phosphofructokinase activity	IEP	Enrichment
MF	GO:0008961	phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity	IEP	Enrichment
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Enrichment
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Enrichment
MF	GO:0019200	carbohydrate kinase activity	IEP	Enrichment
MF	GO:0022832	voltage-gated channel activity	IEP	Enrichment
MF	GO:0022836	gated channel activity	IEP	Enrichment
BP	GO:0032784	regulation of DNA-templated transcription, elongation	IEP	Enrichment
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	Enrichment
BP	GO:0036211	protein modification process	IEP	Enrichment
BP	GO:0043412	macromolecule modification	IEP	Enrichment
BP	GO:0044238	primary metabolic process	IEP	Enrichment
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Enrichment
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEP	Enrichment
BP	GO:0046483	heterocycle metabolic process	IEP	Enrichment
MF	GO:0070001	aspartic-type peptidase activity	IEP	Enrichment
BP	GO:0090304	nucleic acid metabolic process	IEP	Enrichment
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Enrichment
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002053	Glyco_hydro_25	305	491
IPR018337	Cell_wall/Cho-bd_repeat	154	171
IPR018337	Cell_wall/Cho-bd_repeat	215	232
IPR018337	Cell_wall/Cho-bd_repeat	91	109
IPR018337	Cell_wall/Cho-bd_repeat	130	150

External Links

No external refs found!

AAL00235 (spr1431, lytC)

Expression Profile

Co-expression Networks

Functional Annotation