Aliases : spr1526, ABC-MSP
Description : ABC transporter membrane-spanning permease-sugar transport [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].
Gene families : OG_02_0000164 (OrthoFinder) Phylogenetic Tree(s): OG0000164_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AAL00330 | |
Cluster | HCCA: Cluster_6 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC74393 | ycjO, b1311 | putative sugar ABC transporter permease [Ensembl].... | 0.02 | OrthoFinder | |
AAL22416 | STM3556, ugpA | sn-glycerol 3-phosphate transport protein [Ensembl].... | 0.01 | OrthoFinder | |
AEA94460 | OG1RF_11773 | ABC superfamily ATP binding cassette transporter,... | 0.03 | OrthoFinder | |
AKI48147 | L2625_00175 | sugar ABC transporter, permease protein [Ensembl]. ABC... | 0.03 | OrthoFinder | |
AKI48808 | L2625_00881 | sugar ABC transporter, permease protein [Ensembl]. ABC... | 0.08 | OrthoFinder | |
AKI49725 | L2625_01866 | ABC transporter, permease protein [Ensembl]. ABC... | 0.04 | OrthoFinder | |
CCG26272 | No alias | ABC transporter, predicted N-acetylneuraminate transport... | 0.14 | OrthoFinder | |
CCL19864 | BN171_3570013 | ABC-type transport system, sugar-family permease... | 0.03 | OrthoFinder | |
CRP18474 | ugpA | sn-glycerol-3-phosphate transport system permease... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0016020 | membrane | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
MF | GO:0005215 | transporter activity | IEP | Enrichment |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
BP | GO:0005996 | monosaccharide metabolic process | IEP | Enrichment |
BP | GO:0006004 | fucose metabolic process | IEP | Enrichment |
BP | GO:0006810 | transport | IEP | Enrichment |
BP | GO:0008150 | biological_process | IEP | Enrichment |
BP | GO:0008643 | carbohydrate transport | IEP | Enrichment |
MF | GO:0008736 | L-fucose isomerase activity | IEP | Enrichment |
MF | GO:0008982 | protein-N(PI)-phosphohistidine-sugar phosphotransferase activity | IEP | Enrichment |
BP | GO:0009401 | phosphoenolpyruvate-dependent sugar phosphotransferase system | IEP | Enrichment |
BP | GO:0009403 | toxin biosynthetic process | IEP | Enrichment |
BP | GO:0009404 | toxin metabolic process | IEP | Enrichment |
MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | Enrichment |
MF | GO:0016740 | transferase activity | IEP | Enrichment |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Enrichment |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
BP | GO:0019748 | secondary metabolic process | IEP | Enrichment |
MF | GO:0022804 | active transmembrane transporter activity | IEP | Enrichment |
MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Enrichment |
BP | GO:0044550 | secondary metabolite biosynthetic process | IEP | Enrichment |
BP | GO:0051179 | localization | IEP | Enrichment |
BP | GO:0051234 | establishment of localization | IEP | Enrichment |
BP | GO:0071702 | organic substance transport | IEP | Enrichment |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000515 | MetI-like | 63 | 277 |
No external refs found! |