AAL00601 (spr1798)

Aliases : spr1798

Description : Conserved hypothetical protein [Ensembl]. RsgA GTPase, RsgA N-terminal domain [Interproscan].

Gene families : OG_02_0001357 (OrthoFinder) Phylogenetic Tree(s): OG0001357_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAL00601
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AAL23172 STM4349, yjeQ putative GTPase [Ensembl]. RsgA GTPase [Interproscan]. 0.05 OrthoFinder
AKP14873 rsgA, WX61_00806 Putative ribosome biogenesis GTPase RsgA [Ensembl]. RsgA... 0.05 OrthoFinder
CCL19037 BN171_2830005 Putative GTPase [Ensembl]. RsgA GTPase, RsgA N-terminal... 0.04 OrthoFinder
EDJ90304 CGSHi22421_02211 ribosome-associated GTPase [Ensembl]. RsgA GTPase [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004140 dephospho-CoA kinase activity IEP Enrichment
MF GO:0004788 thiamine diphosphokinase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0009143 nucleoside triphosphate catabolic process IEP Enrichment
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0030975 thiamine binding IEP Enrichment
BP GO:0042357 thiamine diphosphate metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR010914 RsgA_GTPase_dom 58 215
IPR031944 RsgA_N 2 55
No external refs found!