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  5. CCG26275

CCG26275


Description : N-acetylneuraminate lyase [Ensembl]. Dihydrodipicolinate synthetase family [Interproscan].


Gene families : OG_02_0000066 (OrthoFinder) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG26275
Cluster HCAA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAC76257 nanA, b3225 N-acetylneuraminate lyase [Ensembl]. Dihydrodipicolinate... 0.07 OrthoFinder
AAK99989 spr1186 N-acetylneuraminate lyase subunit, truncation [Ensembl].... 0.07 OrthoFinder
AAL00324 spr1520 N-acetylneuraminate lyase subunit, truncation [Ensembl].... 0.12 OrthoFinder
AAL22208 STM3339, nanA N-acetylneuraminate lyase [Ensembl]. Dihydrodipicolinate... 0.03 OrthoFinder
AAL22392 STM3532 putative dihydrodipicolinate synthetase [Ensembl].... 0.02 OrthoFinder
CCL20095 dapA, BN171_3690039 Dihydrodipicolinate synthase 4 (DHDPS) [Ensembl].... 0.03 OrthoFinder
CRO79870 dapA_2 4-hydroxy-tetrahydrodipicolinate synthase [Ensembl].... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006050 mannosamine metabolic process IEP Enrichment
BP GO:0006051 N-acetylmannosamine metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
InterPro domains Description Start Stop
IPR002220 DapA-like 7 288
No external refs found!
AAL21032 STM2128, yegO putative resistance protein [Ensembl]. AcrB/AcrD/AcrF... 0.02 OrthoFinder AAL21375 STM2481, acrD RND family aminoglycoside/multidrug efflux pump... 0.03 OrthoFinder AGT21930 N559_0104, EefB multidrug efflux permease EefB [Ensembl]. AcrB/AcrD/AcrF... 0.02 OrthoFinder AGT23206 N559_1451 aminoglycoside/multidrug efflux system [Ensembl].... 0.05 OrthoFinder AGT25399 N559_3763 putative acridine efflux pump [Ensembl]. AcrB/AcrD/AcrF... 0.06 OrthoFinder AHY39622 CJ8421_01835 RND efflux system, inner membrane transporter CmeB... 0.04 OrthoFinder AKP14428 mexB, WX61_00346 Multidrug resistance protein MexB [Ensembl].... 0.1 OrthoFinder CPD13063 swrC, ERS093114_02112 RND multidrug efflux transporter%3B Acriflavin... 0.05 OrthoFinder CRN65212 acrB_1 Acriflavine resistance protein B [Ensembl].... 0.06 OrthoFinder CRO58919 bepE_2 Efflux pump membrane transporter BepE [Ensembl].... 0.04 OrthoFinder CRO88282 mexB Multidrug-efflux transporter MexB [Ensembl].... 0.14 OrthoFinder CRP58341 mdtB_2 Multidrug transporter MdtB [Ensembl]. AcrB/AcrD/AcrF... 0.05 OrthoFinder CRP65676 bepE_3 Efflux pump membrane transporter BepE [Ensembl].... 0.04 OrthoFinder EDJ91679 CGSHi22421_07988 predicted cation/multidrug efflux pump [Ensembl].... 0.04 OrthoFinder
Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015562 efflux transmembrane transporter activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR001036 Acrflvin-R 4 1031
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_01477