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  5. CCG26288

CCG26288


Description : SSU ribosomal protein S12p (S23e) [Ensembl]. Ribosomal protein S12/S23 [Interproscan].


Gene families : OG_02_0000684 (OrthoFinder) Phylogenetic Tree(s): OG0000684_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG26288
Cluster HCAA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC76367 rpsL, b3342 30S ribosomal subunit protein S12 [Ensembl]. Ribosomal... 0.16 OrthoFinder
AAK99052 spr0248, rpsL 30S Ribosomal protein S12 [Ensembl]. Ribosomal protein... 0.14 OrthoFinder
AAL22311 STM3448, rpsL 30S ribosomal subunit protein S12 [Ensembl]. Ribosomal... 0.15 OrthoFinder
ADK87065 rpsL, MPNE_0257 ribosomal protein S12 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
AEA92831 rpsL, OG1RF_10144 30S ribosomal protein S12 [Ensembl]. Ribosomal protein... 0.13 OrthoFinder
AKI50591 rpsL, L2625_02801 ribosomal protein S12 [Ensembl]. Ribosomal protein... 0.11 OrthoFinder
AKP15118 rpsL, WX61_01064 30S ribosomal protein S12 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
CCL20678 rpsL, BN171_90004 30S ribosomal protein S12 [Ensembl]. Ribosomal protein... 0.12 OrthoFinder
CCP43425 rpsL, Rv0682 30S ribosomal protein S12 RpsL [Ensembl]. Ribosomal... 0.09 OrthoFinder
CPC57151 rpsL, ERS093114_00833 30S ribosomal protein S12 [Ensembl]. Ribosomal protein... 0.16 OrthoFinder
CRO73605 rpsL 30S ribosomal protein S12 [Ensembl]. Ribosomal protein... 0.13 OrthoFinder
EDJ90052 CGSHi22421_05925 tRNA uridine 5-carboxymethylaminomethyl modification... 0.09 OrthoFinder
KNA49090 VCV51_033819 ribosomal protein S12 [Ensembl]. Ribosomal protein... 0.1 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004810 tRNA adenylyltransferase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
MF GO:1990817 RNA adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR006032 Ribosomal_S12/S23 31 136
No external refs found!