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  5. CCG26426

CCG26426


Description : SWF/SNF family helicase [Ensembl]. SWIM zinc finger, SNF2 family N-terminal domain, Bacterial SNF2 helicase associated, Helicase conserved C-terminal domain [Interproscan].


Gene families : OG_02_0000965 (OrthoFinder) Phylogenetic Tree(s): OG0000965_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG26426
Cluster HCAA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
CRN91028 No alias ATP-dependent helicase HepA [Ensembl]. SNF2 family... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 40 73
IPR001650 Helicase_C 868 974
IPR013663 Helicase_SWF/SNF/SWI_bac 216 577
IPR000330 SNF2_N 602 853
No external refs found!