CCL19667 (BN171_3370001)

Aliases : BN171_3370001

Description : Transcriptional regulator, AraC family [Ensembl]. Integron-associated effector binding protein, Helix-turn-helix domain [Interproscan].

Gene families : OG_02_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CCL19667
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAC76703 yidL, b3680 AraC family putative transcriptional regulator... 0.02 OrthoFinder
AAL19317 STM0363 putative transcription regulator, AraC family [Ensembl].... 0.03 OrthoFinder
AAL23401 STM4586, rob transcriptional regulator [Ensembl]. Helix-turn-helix... 0.03 OrthoFinder
AEA94354 OG1RF_11667 AraC family transcriptional regulator [Ensembl].... 0.05 OrthoFinder
AKI48081 L2625_00107 transcriptional regulator, AraC family [Ensembl].... 0.04 OrthoFinder
CRO70395 pchR_1 Regulatory protein PchR [Ensembl]. Helix-turn-helix... 0.02 OrthoFinder
KNA58949 VCV51_031249 AraC family Bacterial regulatory helix-turn-helix... 0.03 OrthoFinder
KNA60578 VCV51_032249 AraC family Bacterial regulatory helix-turn-helix... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
InterPro domains Description Start Stop
IPR029441 Cass2 156 288
IPR018060 HTH_AraC 30 107
UniProtKB U3X074