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  5. CCG26583

CCG26583


Description : LSU ribosomal protein L21p [Ensembl]. Ribosomal prokaryotic L21 protein [Interproscan].


Gene families : OG_02_0000351 (OrthoFinder) Phylogenetic Tree(s): OG0000351_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG26583
Cluster HCAA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AAC76218 rplU, b3186 50S ribosomal subunit protein L21 [Ensembl]. Ribosomal... 0.07 OrthoFinder
AAK99816 spr1012, rplU 50S Ribosomal protein L21 [Ensembl]. Ribosomal... 0.04 OrthoFinder
AAL22173 STM3304, rplU 50S ribosomal subunit protein L21 [Ensembl]. Ribosomal... 0.09 OrthoFinder
AEA93390 rplU, OG1RF_10703 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.13 OrthoFinder
AHY39367 rplU, CJ8421_00480 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.09 OrthoFinder
AKI49539 rplU, L2625_01644 ribosomal protein L21 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
CBI66823 rplU, HPB8_1266 large subunit ribosomal protein L21 [Ensembl]. Ribosomal... 0.05 OrthoFinder
CCL17311 rplU, BN171_1430038 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.04 OrthoFinder
CCP45235 rplU, Rv2442c 50S ribosomal protein L21 RplU [Ensembl]. Ribosomal... 0.04 OrthoFinder
CPC84926 rplU, ERS093114_01477 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.14 OrthoFinder
CRN65825 rplU 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.02 OrthoFinder
EDJ91660 CGSHi22421_07893 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.03 OrthoFinder
KNA50264 VCV51_033695 ribosomal protein L21 [Ensembl]. Ribosomal prokaryotic... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
BP GO:0007267 cell-cell signaling IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009372 quorum sensing IEP Enrichment
BP GO:0009595 detection of biotic stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0023052 signaling IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
BP GO:0060245 detection of cell density IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR028909 L21p-like 4 102
No external refs found!