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Aliases : YlqC
Description : KH domain RNA binding protein YlqC [Ensembl]. KH domain [Interproscan].
Gene families : OG_02_0001288 (OrthoFinder) Phylogenetic Tree(s): OG0001288_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CCG26796 | |
| Cluster | HCAA: Cluster_4 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAK99487 | spr0683 | Conserved hypothetical protein [Ensembl]. KH domain... | 0.06 | OrthoFinder | |
| AEA94093 | OG1RF_11406 | KH domain protein [Ensembl]. KH domain [Interproscan]. | 0.08 | OrthoFinder | |
| AHY39940 | CJ8421_03505 | hypothetical protein [Ensembl]. KH domain [Interproscan]. | 0.03 | OrthoFinder | |
| AKI49791 | L2625_01938 | RNA-binding protein (KH domain), putative [Ensembl]. | 0.06 | OrthoFinder | |
| CBI65908 | HPB8_351 | conserved hypothetical protein [Ensembl]. KH domain... | 0.03 | OrthoFinder | |
| CCP45710 | Rv2908c | Conserved hypothetical protein [Ensembl]. KH domain... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0003937 | IMP cyclohydrolase activity | IEP | Enrichment |
| MF | GO:0004071 | aspartate-ammonia ligase activity | IEP | Enrichment |
| MF | GO:0004643 | phosphoribosylaminoimidazolecarboxamide formyltransferase activity | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0006865 | amino acid transport | IEP | Enrichment |
| BP | GO:0009166 | nucleotide catabolic process | IEP | Enrichment |
| MF | GO:0015658 | branched-chain amino acid transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015803 | branched-chain amino acid transport | IEP | Enrichment |
| BP | GO:0015833 | peptide transport | IEP | Enrichment |
| BP | GO:0015849 | organic acid transport | IEP | Enrichment |
| MF | GO:0016603 | glutaminyl-peptide cyclotransferase activity | IEP | Enrichment |
| MF | GO:0016755 | aminoacyltransferase activity | IEP | Enrichment |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Enrichment |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Enrichment |
| MF | GO:0019238 | cyclohydrolase activity | IEP | Enrichment |
| MF | GO:0019843 | rRNA binding | IEP | Enrichment |
| BP | GO:0042886 | amide transport | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |