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Description : Single-stranded DNA-binding protein [Ensembl]. Single-strand binding protein family [Interproscan].
Gene families : OG_02_0000128 (OrthoFinder) Phylogenetic Tree(s): OG0000128_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CCG26823 | |
| Cluster | HCAA: Cluster_4 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAL00199 | spr1395, ssbA | Single stranded binding protein [Ensembl]. Single-strand... | 0.11 | OrthoFinder | |
| AEA92695 | ssb, OG1RF_10008 | single-stranded DNA-binding protein [Ensembl].... | 0.07 | OrthoFinder | |
| AHY40277 | CJ8421_05325 | single-stranded DNA-binding protein [Ensembl].... | 0.12 | OrthoFinder | |
| CBI65792 | ssb, HPB8_235 | single-strand DNA-binding protein [Ensembl].... | 0.05 | OrthoFinder | |
| CCL20148 | ssb, BN171_3710002 | Single-stranded DNA-binding protein (Helix-destabilizing... | 0.06 | OrthoFinder | |
| CPC89742 | ssb_1, ERS093114_01561 | single-stranded DNA-binding protein [Ensembl].... | 0.16 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0003896 | DNA primase activity | IEP | Enrichment |
| MF | GO:0004071 | aspartate-ammonia ligase activity | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| BP | GO:0006865 | amino acid transport | IEP | Enrichment |
| BP | GO:0007154 | cell communication | IEP | Enrichment |
| BP | GO:0007267 | cell-cell signaling | IEP | Enrichment |
| MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009372 | quorum sensing | IEP | Enrichment |
| BP | GO:0009595 | detection of biotic stimulus | IEP | Enrichment |
| BP | GO:0009607 | response to biotic stimulus | IEP | Enrichment |
| MF | GO:0015267 | channel activity | IEP | Enrichment |
| MF | GO:0015658 | branched-chain amino acid transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015803 | branched-chain amino acid transport | IEP | Enrichment |
| BP | GO:0015849 | organic acid transport | IEP | Enrichment |
| MF | GO:0016603 | glutaminyl-peptide cyclotransferase activity | IEP | Enrichment |
| MF | GO:0016755 | aminoacyltransferase activity | IEP | Enrichment |
| MF | GO:0019843 | rRNA binding | IEP | Enrichment |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0023052 | signaling | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0044764 | multi-organism cellular process | IEP | Enrichment |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
| BP | GO:0051606 | detection of stimulus | IEP | Enrichment |
| BP | GO:0051704 | multi-organism process | IEP | Enrichment |
| BP | GO:0060245 | detection of cell density | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000424 | Primosome_PriB/ssb | 2 | 103 |
| No external refs found! |