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  5. CCL19713

CCL19713 (BN171_3410005)


Aliases : BN171_3410005

Description : Putative sigma-54 interacting protein (fragment) [Ensembl]. Bacterial regulatory protein [Interproscan].


Gene families : OG_02_0000008 (OrthoFinder) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL19713
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAC74405 tyrR, b1323 aromatic amino acid biosynthesis and transport regulon... 0.03 OrthoFinder
AAC75280 atoC, b2220 fused response regulator of ato operon, in two-component... 0.01 OrthoFinder
AAC76978 zraR, b4004 fused DNA-binding response regulator in two-component... 0.02 OrthoFinder
AAL19321 STM0367, prpR regulator for prp operon (EBP family) [Ensembl].... 0.01 OrthoFinder
AAL21456 STM2562, yfhA putative transcriptional regulator of two-component... 0.03 OrthoFinder
AGT22959 N559_1193 anaerobic nitric oxide reductase transcription regulator... 0.04 OrthoFinder
AGT23137 N559_1375 putative 2-component transcriptional regulator... 0.03 OrthoFinder
AKP15094 glnG, WX61_01036 Nitrogen regulation protein NR(I) [Ensembl]. Sigma-54... 0.03 OrthoFinder
AKP15503 zraR, WX61_01457 Transcriptional regulatory protein ZraR [Ensembl].... 0.03 OrthoFinder
CRO39560 dctD_1 C4-dicarboxylate transport transcriptional regulatory... 0.01 OrthoFinder
CRO96924 No alias (S)-limonene 6-monooxygenase [Ensembl]. PAS fold,... 0.03 OrthoFinder
KNA55086 VCV51_031847 nitrogen regulation protein NR(I) [Ensembl]. Sigma-54... 0.04 OrthoFinder
KNA58588 VCV51_031119 psp operon transcriptional activator [Ensembl]. Sigma-54... 0.04 OrthoFinder
KNA60650 VCV51_032089 sigma-54 interaction domain-containing protein... 0.04 OrthoFinder
KNA60791 VCV51_032053 sigma-54 interaction domain-containing protein... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0008705 methionine synthase activity IEP Enrichment
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002197 HTH_Fis 79 122
UniProtKB U3X0B7