CCG26924


Description : Two-component system response regulator [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].


Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG26924
Cluster HCAA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AAC76061 qseB, b3025 quorum sensing DNA-binding response regulator in... 0.04 OrthoFinder
AAK99511 spr0707, ciaR Response regulator, transcriptional regulatory protein... 0.04 OrthoFinder
AAL21035 STM2131, baeR response regulator in two-component regulatory system... 0.03 OrthoFinder
AAL22051 STM3177, ygiX putative transcriptional regulator [Ensembl]. Response... 0.03 OrthoFinder
AEA93340 OG1RF_10653 response regulator [Ensembl]. Response regulator... 0.04 OrthoFinder
AGT22192 N559_0379 osmolarity response regulator [Ensembl]. Response... 0.03 OrthoFinder
AGT25698 N559_4072, PhoB transcriptional regulator PhoB [Ensembl]. Response... 0.03 OrthoFinder
AKI48258 L2625_00311 DNA-binding response regulator [Ensembl]. OmpR/PhoB-type... 0.03 OrthoFinder
CCL16989 BN171_1060003 Two-component response regulator [Ensembl]. Response... 0.07 OrthoFinder
CCL17650 BN171_1640040 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCL17829 vanR, BN171_1830003 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCL17877 BN171_1920004 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCL18024 BN171_2030010 Two-component response regulator [Ensembl]. Response... 0.04 OrthoFinder
CCL18215 BN171_2170002 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCL18738 BN171_260007 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCL19749 BN171_3450003 Two-component response regulator [Ensembl]. Response... 0.04 OrthoFinder
CCL20055 BN171_3670038 Two-component response regulator, CheY family [Ensembl].... 0.04 OrthoFinder
CCL20132 BN171_370006 Two-component response regulator [Ensembl]. Response... 0.04 OrthoFinder
CCP43651 prrA, Rv0903c Two component response transcriptional regulatory... 0.02 OrthoFinder
CPC31435 arlR, ERS093114_00002 Putative response regulator ArlR [Ensembl].... 0.06 OrthoFinder
CPC70217 vicR, ERS093114_01104 Two-component response regulator [Ensembl].... 0.03 OrthoFinder
CRO38230 rstA Transcriptional regulatory protein RstA [Ensembl].... 0.03 OrthoFinder
CRO52494 czcR_1 Transcriptional activator protein CzcR [Ensembl].... 0.04 OrthoFinder
CRO55563 arcA_1 Dye resistance protein [Ensembl]. Response regulator... 0.03 OrthoFinder
CRP32671 czcR_3 Transcriptional activator protein CzcR [Ensembl].... 0.03 OrthoFinder
CRP43486 qseB_3 Transcriptional regulatory protein QseB [Ensembl].... 0.03 OrthoFinder
CRP45027 ompR_4 Transcriptional regulatory protein OmpR [Ensembl].... 0.03 OrthoFinder
CRP51890 walR_2 Transcriptional regulatory protein WalR [Ensembl].... 0.03 OrthoFinder
CRP58313 czcR_4 Transcriptional activator protein CzcR [Ensembl].... 0.03 OrthoFinder
CRP63214 ompR_5 Transcriptional regulatory protein OmpR [Ensembl].... 0.03 OrthoFinder
KNA55120 VCV51_031823 response regulator receiver domain-containing protein... 0.02 OrthoFinder
KNA58243 VCV51_032751 response regulator receiver domain-containing protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001867 OmpR/PhoB-type_DNA-bd 144 213
IPR001789 Sig_transdc_resp-reg_receiver 4 112
No external refs found!