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  5. CCG27180

CCG27180


Description : Histidine transport protein (permease) [Ensembl]. Amino acid permease [Interproscan].


Gene families : OG_02_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27180
Cluster HCAA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAL21104 STM2200, lysP APC family lysine-specific permease [Ensembl]. Amino... 0.02 OrthoFinder
AGT24557 N559_2888 aromatic amino acid transport protein [Ensembl]. Amino... 0.03 OrthoFinder
AGT25437 N559_3801 phenylalanine transporter [Ensembl]. Amino acid... 0.07 OrthoFinder
AGT25695 N559_4069 putative proline-specific permease [Ensembl]. Amino acid... 0.04 OrthoFinder
AGT25729 N559_4103 S-methylmethionine transporter [Ensembl]. Amino acid... 0.03 OrthoFinder
AGT25927 N559_4312 aromatic amino acid transporter [Ensembl]. Amino acid... 0.03 OrthoFinder
AGT26287 N559_4695 D-alanine/D-serine/glycine permease [Ensembl]. Amino... 0.02 OrthoFinder
AGT26571 N559_4989, YifK putative transport protein YifK [Ensembl]. Amino acid... 0.03 OrthoFinder
CPC86559 aapA, ERS093114_01519 D-serine/D-alanine/glycine transporter [Ensembl]. Amino... 0.04 OrthoFinder
CRP77596 lysP Lysine-specific permease [Ensembl]. Amino acid permease... 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR004841 AA-permease/SLC12A_dom 24 445
No external refs found!