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  5. CCG27388

CCG27388


Description : SSU ribosomal protein S17p (S11e) [Ensembl]. Ribosomal protein S17 [Interproscan].


Gene families : OG_02_0000567 (OrthoFinder) Phylogenetic Tree(s): OG0000567_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27388
Cluster HCAA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AAC76336 rpsQ, b3311 30S ribosomal subunit protein S17 [Ensembl]. Ribosomal... 0.29 OrthoFinder
AAK99002 spr0198, rpsQ 30S Ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder
AAL22294 STM3431, rpsQ 30S ribosomal subunit protein S17 [Ensembl]. Ribosomal... 0.29 OrthoFinder
ADK87159 rpsQ, MPNE_0203 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.18 OrthoFinder
AEA92847 rpsQ, OG1RF_10160 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.3 OrthoFinder
AHY40883 rpsQ, CJ8421_08555 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.21 OrthoFinder
AKI50558 rpsQ, L2625_02768 ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.25 OrthoFinder
AKP15132 rpsQ, WX61_01078 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.12 OrthoFinder
CBI65726 rpsQ, HPB8_169 small subunit ribosomal protein S17 [Ensembl]. Ribosomal... 0.08 OrthoFinder
CCL20572 rpsQ, BN171_70012 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.23 OrthoFinder
CCP43454 rpsQ, Rv0710 30S ribosomal protein S17 RpsQ [Ensembl]. Ribosomal... 0.14 OrthoFinder
CRO74018 rpsQ 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.22 OrthoFinder
EDJ91363 CGSHi22421_04648 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.25 OrthoFinder
KNA54981 VCV51_033164 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.22 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 11 78
No external refs found!