CCG27487

Description : Peptide chain release factor 1 [Ensembl]. PCRF domain, RF-1 domain [Interproscan].

Gene families : OG_02_0000562 (OrthoFinder) Phylogenetic Tree(s): OG0000562_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CCG27487
Cluster	HCAA: Cluster_17

Target	Alias	Description	ECC score	Gene Family Method
AGT23764	N559_2043	peptide chain release factor 1 [Ensembl]. RF-1 domain,...	0.03	OrthoFinder
AHY40785	prfA, CJ8421_08065	peptide chain release factor 1 [Ensembl]. PCRF domain,...	0.03	OrthoFinder
AKP14400	prfA, WX61_00317	Peptide chain release factor 1 [Ensembl]. PCRF domain,...	0.05	OrthoFinder
CCL19952	prfA, BN171_3600030	Peptide chain release factor 1 (RF-1) [Ensembl]. PCRF...	0.07	OrthoFinder
CCP44056	prfA, Rv1299	Probable peptide chain release factor 1 PrfA (RF-1)...	0.02	OrthoFinder
CRO62339	prfA	Peptide chain release factor 1 [Ensembl]. RF-1 domain,...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003747	translation release factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006415	translational termination	IEA	Interproscan
MF	GO:0008079	translation termination factor activity	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022411	cellular component disassembly	None	Extended
BP	GO:0032984	protein-containing complex disassembly	None	Extended
BP	GO:0043624	cellular protein complex disassembly	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Enrichment
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Enrichment
BP	GO:0006396	RNA processing	IEP	Enrichment
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Enrichment
BP	GO:0006807	nitrogen compound metabolic process	IEP	Enrichment
BP	GO:0008152	metabolic process	IEP	Enrichment
BP	GO:0009058	biosynthetic process	IEP	Enrichment
BP	GO:0009116	nucleoside metabolic process	IEP	Enrichment
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Enrichment
MF	GO:0036094	small molecule binding	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
MF	GO:0043168	anion binding	IEP	Enrichment
BP	GO:0044237	cellular metabolic process	IEP	Enrichment
BP	GO:0046483	heterocycle metabolic process	IEP	Enrichment
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Enrichment
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Enrichment
BP	GO:0071704	organic substance metabolic process	IEP	Enrichment
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Enrichment
MF	GO:1901265	nucleoside phosphate binding	IEP	Enrichment
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Enrichment
BP	GO:1901657	glycosyl compound metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005139	PCRF	11	205
IPR000352	Pep_chain_release_fac_I	213	322

External Links

No external refs found!