CCL19965 (hbs, BN171_3610008)

Aliases : hbs, BN171_3610008

Description : Non-specific DNA-binding protein HBsu; signal recognition particle-like (SRP) component [Ensembl]. Bacterial DNA-binding protein [Interproscan].

Gene families : OG_02_0000100 (OrthoFinder) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CCL19965
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AAC76974 hupA, b4000 HU, DNA-binding transcriptional regulator, alpha subunit... 0.02 OrthoFinder
AAK99824 spr1020, hlpA Histone-like DNA-binding protein [Ensembl]. Bacterial... 0.04 OrthoFinder
AKI49929 hup, L2625_02080 DNA-binding protein [Ensembl]. Histone-like DNA-binding... 0.03 OrthoFinder
CCG26568 No alias DNA-binding protein HBsu [Ensembl]. Bacterial... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000150 DNA strand exchange activity IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000119 Hist_DNA-bd 1 82
UniProtKB U3X468