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  5. CCL20119

CCL20119 (licA, BN171_3690063)


Aliases : licA, BN171_3690063

Description : PTS system, lichenan-specific IIA component [Ensembl]. PTS system [Interproscan].


Gene families : OG_02_0000104 (OrthoFinder) Phylogenetic Tree(s): OG0000104_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL20119
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AGT22928 N559_1159 PEP-dependent phosphotransferase enzyme III [Ensembl]. 0.05 OrthoFinder
AGT24711 N559_3048 PTS system N,N'-diacetylchitobiose-specific transporter... 0.03 OrthoFinder
AGT26514 N559_4930 putative PEP-dependent phosphotransferase enzyme III [Ensembl]. 0.02 OrthoFinder
AKI49713 L2625_01854 PTS system, beta-glucoside-specific, IIA component... 0.04 OrthoFinder
CCL19521 BN171_3190006 PTS system, lactose/cellobiose-family IIA component... 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
InterPro domains Description Start Stop
IPR003188 PTS_IIA_lac/cel 7 99
UniProtKB U3X133