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CCP43453 (rpmC, Rv0709)


Aliases : rpmC, Rv0709

Description : 50S ribosomal protein L29 RpmC [Ensembl]. Ribosomal L29 protein [Interproscan].


Gene families : OG_02_0000484 (OrthoFinder) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCP43453
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AAC76337 rpmC, b3312 50S ribosomal subunit protein L29 [Ensembl]. Ribosomal... 0.19 OrthoFinder
AAK99001 spr0197, rpmC 50S Ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.1 OrthoFinder
AAL22295 STM3432, rpmC 50S ribosomal subunit protein L29 [Ensembl]. Ribosomal... 0.19 OrthoFinder
AEA92846 rpmC, OG1RF_10159 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.11 OrthoFinder
AGT22250 N559_0442 50S ribosomal protein L29 [Ensembl]. 0.07 OrthoFinder
AHY40884 CJ8421_08560 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.12 OrthoFinder
AKI50559 rpmC, L2625_02769 ribosomal protein L29 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
AKP15131 rpmC, WX61_01077 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.1 OrthoFinder
CBI65725 rpmC, HPB8_168 large subunit ribosomal protein L2 [Ensembl]. Ribosomal... 0.03 OrthoFinder
CCG27387 No alias LSU ribosomal protein L29p (L35e) [Ensembl]. Ribosomal... 0.1 OrthoFinder
CCL20571 rpmC, BN171_70011 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.09 OrthoFinder
CPD13781 rpmC, ERS093114_02130 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.19 OrthoFinder
CRO73990 rpmC 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.15 OrthoFinder
EDJ91362 CGSHi22421_04643 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.13 OrthoFinder
KNA54980 VCV51_033163 ribosomal L29 protein [Ensembl]. Ribosomal L29 protein... 0.12 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 9 64
No external refs found!