Coexpression cluster: Cluster_25 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043226 organelle 12.21% (21/172) 3.69 0.0 0.0
GO:0005840 ribosome 12.21% (21/172) 3.69 0.0 0.0
GO:0043228 non-membrane-bounded organelle 12.21% (21/172) 3.69 0.0 0.0
GO:0043229 intracellular organelle 12.21% (21/172) 3.69 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 12.21% (21/172) 3.69 0.0 0.0
GO:0006412 translation 11.63% (20/172) 3.62 0.0 0.0
GO:0006518 peptide metabolic process 11.63% (20/172) 3.58 0.0 0.0
GO:0003735 structural constituent of ribosome 11.63% (20/172) 3.58 0.0 0.0
GO:0043043 peptide biosynthetic process 11.63% (20/172) 3.58 0.0 0.0
GO:0005198 structural molecule activity 11.63% (20/172) 3.58 0.0 0.0
GO:0043604 amide biosynthetic process 11.63% (20/172) 3.51 0.0 0.0
GO:0043603 cellular amide metabolic process 11.63% (20/172) 3.48 0.0 0.0
GO:0044267 cellular protein metabolic process 12.21% (21/172) 3.27 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 12.21% (21/172) 3.27 0.0 0.0
GO:0009059 macromolecule biosynthetic process 12.21% (21/172) 2.92 0.0 0.0
GO:0019538 protein metabolic process 12.79% (22/172) 2.65 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 12.21% (21/172) 2.22 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 13.37% (23/172) 1.99 0.0 0.0
GO:0110165 cellular anatomical entity 15.7% (27/172) 1.66 0.0 1e-06
GO:1901566 organonitrogen compound biosynthetic process 11.63% (20/172) 2.01 0.0 1e-06
GO:0043170 macromolecule metabolic process 15.12% (26/172) 1.55 0.0 5e-06
GO:0005575 cellular_component 15.7% (27/172) 1.5 1e-06 6e-06
GO:1901564 organonitrogen compound metabolic process 14.53% (25/172) 1.54 1e-06 9e-06
GO:1901576 organic substance biosynthetic process 13.37% (23/172) 1.51 3e-06 3.4e-05
GO:0044249 cellular biosynthetic process 12.79% (22/172) 1.52 5e-06 5.1e-05
GO:0009058 biosynthetic process 13.95% (24/172) 1.4 8e-06 7.5e-05
GO:0044238 primary metabolic process 19.19% (33/172) 1.09 1.6e-05 0.000138
GO:0019843 rRNA binding 2.33% (4/172) 4.22 1.6e-05 0.000142
GO:0034641 cellular nitrogen compound metabolic process 13.37% (23/172) 1.26 6.2e-05 0.000521
GO:0006807 nitrogen compound metabolic process 16.28% (28/172) 1.01 0.000217 0.001775
GO:0008152 metabolic process 21.51% (37/172) 0.83 0.000241 0.001902
GO:0071704 organic substance metabolic process 19.19% (33/172) 0.86 0.000388 0.00297
GO:0044237 cellular metabolic process 16.86% (29/172) 0.92 0.000478 0.003549
GO:0003723 RNA binding 3.49% (6/172) 2.27 0.001177 0.008483
GO:0009987 cellular process 19.19% (33/172) 0.69 0.003123 0.02186
GO:0019346 transsulfuration 1.16% (2/172) 3.96 0.005313 0.030269
GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters 1.16% (2/172) 3.96 0.005313 0.030269
GO:0004540 ribonuclease activity 1.16% (2/172) 3.96 0.005313 0.030269
GO:0009092 homoserine metabolic process 1.16% (2/172) 3.96 0.005313 0.030269
GO:0004521 endoribonuclease activity 1.16% (2/172) 3.96 0.005313 0.030269
GO:0006534 cysteine metabolic process 1.16% (2/172) 3.96 0.005313 0.030269
GO:0050667 homocysteine metabolic process 1.16% (2/172) 3.96 0.005313 0.030269
GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 1.16% (2/172) 3.96 0.005313 0.030269
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_8 0.076 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_2 0.092 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_7 0.047 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_12 0.03 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_18 0.05 OrthoFinder Compare
Escherichia coli HCCA Cluster_1 0.115 OrthoFinder Compare
Escherichia coli HCCA Cluster_37 0.034 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_17 0.084 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_9 0.076 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_12 0.05 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_34 0.036 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_38 0.034 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_2 0.087 OrthoFinder Compare
Mycoplasma pneumoniae HCAA Cluster_3 0.028 OrthoFinder Compare
Mycoplasma pneumoniae HCAA Cluster_5 0.063 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_5 0.031 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_6 0.049 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_22 0.081 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_63 0.03 OrthoFinder Compare
Salmonella enterica HCCA Cluster_23 0.147 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_19 0.031 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_24 0.111 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_7 0.043 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_13 0.073 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_4 0.076 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_11 0.036 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_8 0.101 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_24 0.039 OrthoFinder Compare
Sequences (172) (download table)

InterPro Domains

GO Terms

Family Terms