CCP43765 (rplY, Rv1015c)


Aliases : rplY, Rv1015c

Description : 50S ribosomal protein L25 RplY [Ensembl]. Ribosomal protein TL5, Ribosomal L25p family [Interproscan].


Gene families : OG_02_0000710 (OrthoFinder) Phylogenetic Tree(s): OG0000710_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCP43765
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC75246 rplY, b2185 50S ribosomal subunit protein L25 [Ensembl]. Ribosomal... 0.04 OrthoFinder
AAL21127 STM2224, rplY 50S ribosomal subunit protein L25 [Ensembl]. Ribosomal... 0.02 OrthoFinder
AGT23381 N559_1635 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5... 0.02 OrthoFinder
CRO62512 rplY General stress protein CTC [Ensembl]. Ribosomal L25p... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0008097 5S rRNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003883 CTP synthase activity IEP Enrichment
BP GO:0006071 glycerol metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Enrichment
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0019203 carbohydrate phosphatase activity IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0019400 alditol metabolic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
MF GO:0050308 sugar-phosphatase activity IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR020057 Ribosomal_L25_b-dom 103 181
IPR029751 Ribosomal_L25 9 95
No external refs found!