1. Home
  2. Species
  3. Mycobacterium tuberculosis
  4. Sequence
  5. CCP44466

CCP44466 (Rv1701)


Aliases : Rv1701

Description : Probable integrase/recombinase [Ensembl]. Phage integrase family [Interproscan].


Gene families : OG_02_0000060 (OrthoFinder) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCP44466
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AAC76814 xerC, b3811 site-specific tyrosine recombinase [Ensembl]. Phage... 0.02 OrthoFinder
CBI66435 xerC, HPB8_878 integrase-recombinase protein (XerCD family) [Ensembl].... 0.03 OrthoFinder
EDJ90488 xerD, CGSHi22421_06307 site-specific tyrosine recombinase XerD [Ensembl]. Phage... 0.03 OrthoFinder
KNA53620 VCV51_030091, XerC tyrosine recombinase XerC [Ensembl]. Phage integrase... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006310 DNA recombination IEA Interproscan
BP GO:0015074 DNA integration IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Enrichment
BP GO:0006098 pentose-phosphate shunt IEP Enrichment
BP GO:0006304 DNA modification IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006740 NADPH regeneration IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
MF GO:0043546 molybdopterin cofactor binding IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0051156 glucose 6-phosphate metabolic process IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR004107 Integrase_SAM-like_N 8 98
IPR002104 Integrase_catalytic 120 294
No external refs found!