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  5. CCP45235

CCP45235 (rplU, Rv2442c)


Aliases : rplU, Rv2442c

Description : 50S ribosomal protein L21 RplU [Ensembl]. Ribosomal prokaryotic L21 protein [Interproscan].


Gene families : OG_02_0000351 (OrthoFinder) Phylogenetic Tree(s): OG0000351_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCP45235
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AAC76218 rplU, b3186 50S ribosomal subunit protein L21 [Ensembl]. Ribosomal... 0.13 OrthoFinder
AAK99816 spr1012, rplU 50S Ribosomal protein L21 [Ensembl]. Ribosomal... 0.07 OrthoFinder
AAL22173 STM3304, rplU 50S ribosomal subunit protein L21 [Ensembl]. Ribosomal... 0.13 OrthoFinder
ADK86995 rplU, MPNE_0378 ribosomal protein L21 [Ensembl]. Ribosomal prokaryotic... 0.02 OrthoFinder
AEA93390 rplU, OG1RF_10703 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.11 OrthoFinder
AGT22369 N559_0571 50S ribosomal protein L21 [Ensembl]. 0.03 OrthoFinder
AHY39367 rplU, CJ8421_00480 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.14 OrthoFinder
AKP14815 rplU, WX61_00743 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.07 OrthoFinder
CBI66823 rplU, HPB8_1266 large subunit ribosomal protein L21 [Ensembl]. Ribosomal... 0.04 OrthoFinder
CCG26583 No alias LSU ribosomal protein L21p [Ensembl]. Ribosomal... 0.04 OrthoFinder
CCL17311 rplU, BN171_1430038 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.1 OrthoFinder
CPC84926 rplU, ERS093114_01477 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.14 OrthoFinder
CRN65825 rplU 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.12 OrthoFinder
EDJ91660 CGSHi22421_07893 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.02 OrthoFinder
KNA50264 VCV51_033695 ribosomal protein L21 [Ensembl]. Ribosomal prokaryotic... 0.08 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR028909 L21p-like 5 103
No external refs found!