1. Home
  2. Species
  3. Mycobacterium tuberculosis
  4. Sequence
  5. CCP45711

CCP45711 (rpsP, Rv2909c)


Aliases : rpsP, Rv2909c

Description : 30S ribosomal protein S16 RpsP [Ensembl]. Ribosomal protein S16 [Interproscan].


Gene families : OG_02_0000374 (OrthoFinder) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCP45711
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AAC75658 rpsP, b2609 30S ribosomal subunit protein S16 [Ensembl]. Ribosomal... 0.17 OrthoFinder
AAK99486 spr0682, rpsP 30S Ribosomal protein S16 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
AAL21565 STM2676, rpsP 30S ribosomal subunit protein S16 [Ensembl]. Ribosomal... 0.17 OrthoFinder
ADK87236 rpsP, MPNE_0770 ribosomal protein S16 [Ensembl]. Ribosomal protein S16... 0.03 OrthoFinder
AEA94094 rpsP, OG1RF_11407 30S ribosomal protein S16 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
CCL17407 rpsP, BN171_1490001 30S ribosomal protein S16 [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
CPC35905 rpsP, ERS093114_00186 30S ribosomal protein S16 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
CRO16871 rpsP 30S ribosomal protein S16 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
EDJ90616 CGSHi22421_01387 30S ribosomal protein S16 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
KNA51822 VCV51_033509 ribosomal protein S16 [Ensembl]. Ribosomal protein S16... 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004526 ribonuclease P activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0009251 glucan catabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0030243 cellulose metabolic process IEP Enrichment
BP GO:0030245 cellulose catabolic process IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044247 cellular polysaccharide catabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051275 beta-glucan catabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR000307 Ribosomal_S16 9 67
No external refs found!