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  5. CCL20486

CCL20486 (BN171_550008)


Aliases : BN171_550008

Description : Putative diguanylate kinase signaling protein (fragment) [Ensembl]. Diguanylate cyclase [Interproscan].


Gene families : OG_02_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL20486
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAC74110 dgcT, b1025 diguanylate cyclase, membrane-anchored [Ensembl].... 0.03 OrthoFinder
AGT24792 N559_3131 putative sensor kinase [Ensembl]. GGDEF domain, HAMP... 0.03 OrthoFinder
AGT25034 N559_3381 diguanylate cyclase domain protein [Ensembl]. GGDEF... 0.03 OrthoFinder
AGT26512 N559_4928 hypothetical protein [Ensembl]. GGDEF domain, Cache... 0.03 OrthoFinder
CCL17159 BN171_1330020 Two-component sensor histidine kinase [Ensembl].... 0.06 OrthoFinder
CCL19382 BN171_3090001 Putative diguanylate kinase signaling protein [Ensembl].... 0.05 OrthoFinder
CRN70164 gmr_2 Cyclic di-GMP phosphodiesterase Gmr [Ensembl]. PAS fold,... 0.03 OrthoFinder
CRO51132 pleD_1 Stalked cell differentiation-controlling protein... 0.02 OrthoFinder
CRO93456 ydaM_1 putative diguanylate cyclase YdaM [Ensembl]. PAS fold,... 0.01 OrthoFinder
KNA51667 VCV51_031494 GGDEF domain-containing protein [Ensembl]. Cache domain,... 0.04 OrthoFinder
KNA54690 VCV51_030775 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.04 OrthoFinder
KNA54882 VCV51_031808 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
KNA55694 VCV51_031005 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.05 OrthoFinder
KNA55698 VCV51_031009 CHASE domain-containing protein [Ensembl]. CHASE domain,... 0.03 OrthoFinder
KNA56144 VCV51_032984 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.04 OrthoFinder
KNA59959 VCV51_032371 GGDEF domain-containing protein [Ensembl]. PAS fold,... 0.03 OrthoFinder
KNA60732 VCV51_032172 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.04 OrthoFinder
KNA61013 VCV51_031988 GGDEF domain-containing protein [Ensembl]. PAS domain,... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Enrichment
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR000160 GGDEF_dom 146 295
UniProtKB U3X2A4