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CCP46105 (sigF, Rv3286c)


Aliases : sigF, Rv3286c

Description : Alternative RNA polymerase sigma factor SigF [Ensembl]. Sigma-70 region 3, Sigma-70 region 2 [Interproscan].


Gene families : OG_02_0000698 (OrthoFinder) Phylogenetic Tree(s): OG0000698_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCP46105
Cluster HCCA: Cluster_11


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006352 DNA-templated transcription, initiation IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016805 dipeptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR007627 RNA_pol_sigma70_r2 23 91
IPR007630 RNA_pol_sigma70_r4 188 237
IPR007624 RNA_pol_sigma70_r3 105 166
No external refs found!