1. Home
  2. Species
  3. Pseudomonas aeruginosa
  4. Sequence
  5. CRN65841

CRN65841 (rpmA)


Aliases : rpmA

Description : 50S ribosomal protein L27 [Ensembl]. Ribosomal L27 protein [Interproscan].


Gene families : OG_02_0000421 (OrthoFinder) Phylogenetic Tree(s): OG0000421_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRN65841
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AAC76217 rpmA, b3185 50S ribosomal subunit protein L27 [Ensembl]. Ribosomal... 0.16 OrthoFinder
AAL22172 STM3303, rpmA 50S ribosomal subunit protein L27 [Ensembl]. Ribosomal... 0.25 OrthoFinder
ADK87189 rpmA, MPNE_0380 ribosomal protein L27 [Ensembl]. Ribosomal L27 protein... 0.03 OrthoFinder
AEA93392 rpmA, OG1RF_10705 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.15 OrthoFinder
AGT22370 N559_0572 50S ribosomal protein L27 [Ensembl]. 0.06 OrthoFinder
AHY39368 rpmA, CJ8421_00485 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.09 OrthoFinder
AKI49537 rpmA, L2625_01642 ribosomal protein L27 [Ensembl]. Ribosomal protein L27... 0.12 OrthoFinder
CBI66822 rpmA, HPB8_1265 large subunit ribosomal protein L27 [Ensembl]. Ribosomal... 0.04 OrthoFinder
CCG26585 No alias LSU ribosomal protein L27p [Ensembl]. Ribosomal L27... 0.11 OrthoFinder
CCL17313 rpmA, BN171_1430040 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.06 OrthoFinder
CCP45234 rpmA, Rv2441c 50S ribosomal protein L27 RpmA [Ensembl]. Ribosomal L27... 0.08 OrthoFinder
CPC84847 rpmA, ERS093114_01475 50S ribosomal protein L25 [Ensembl]. Ribosomal L27... 0.22 OrthoFinder
EDJ91659 rpmA, CGSHi22421_07888 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.07 OrthoFinder
KNA50265 VCV51_033696 ribosomal L27 protein [Ensembl]. Ribosomal L27 protein... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
MF GO:0008924 malate dehydrogenase (quinone) activity IEP Enrichment
BP GO:0009141 nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001684 Ribosomal_L27 2 82
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_00118