1. Home
  2. Species
  3. Pseudomonas aeruginosa
  4. Sequence
  5. CRN88785

CRN88785


Description : integrating conjugative element relaxase, PFGI-1 class [Ensembl]. Putative helicase, Putative conjugal transfer nickase/helicase TraI C-term [Interproscan].


Gene families : OG_02_0002007 (OrthoFinder) Phylogenetic Tree(s): OG0002007_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRN88785
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AGT22623 N559_0833 hypothetical protein [Ensembl]. Putative helicase,... 0.07 OrthoFinder
CRN66462 No alias integrating conjugative element relaxase, PFGI-1 class... 0.13 OrthoFinder
EDJ90703 CGSHi22421_00025 hypothetical protein [Ensembl]. Putative helicase,... 0.13 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0030255 protein secretion by the type IV secretion system IEP Enrichment
BP GO:0044097 secretion by the type IV secretion system IEP Enrichment
InterPro domains Description Start Stop
IPR011093 TraI_2_C 440 562
IPR011119 Unchr_helicase_relaxase_TraI 2 312
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_00895