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  5. CRN93079

CRN93079


Description : type IV secretion system ATPase VirB4 [Ensembl]. F pilus assembly Type-IV secretion system for plasmid transfer [Interproscan].


Gene families : OG_02_0002475 (OrthoFinder) Phylogenetic Tree(s): OG0002475_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRN93079
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AGT22597 N559_0807 hypothetical protein [Ensembl]. F pilus assembly Type-IV... 0.14 OrthoFinder
CRN66794 No alias conjugal transfer protein TrbE [Ensembl]. F pilus... 0.26 OrthoFinder
EDJ90748 CGSHi22421_00250 hypothetical protein [Ensembl]. F pilus assembly Type-IV... 0.16 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
BP GO:0030255 protein secretion by the type IV secretion system IEP Enrichment
BP GO:0044097 secretion by the type IV secretion system IEP Enrichment
InterPro domains Description Start Stop
IPR025955 TraC/Conjuga_ATPase 66 340
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_01017