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CRN94540


Description : putative transcriptional regulator [Ensembl]. Prophage CP4-57 regulatory protein (AlpA) [Interproscan].


Gene families : OG_02_0001015 (OrthoFinder) Phylogenetic Tree(s): OG0001015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRN94540
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AGT25767 N559_4142, AlpA phage transcriptional regulator, AlpA [Ensembl]. 0.02 OrthoFinder
AGT26194 N559_4595, AlpA phage transcriptional regulator, AlpA [Ensembl]. 0.08 OrthoFinder
CRN75577 No alias putative transcriptional regulator [Ensembl]. Prophage... 0.23 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0030255 protein secretion by the type IV secretion system IEP Enrichment
BP GO:0044097 secretion by the type IV secretion system IEP Enrichment
InterPro domains Description Start Stop
IPR010260 AlpA 14 64
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_01070