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  5. AEA92695

AEA92695 (ssb, OG1RF_10008)


Aliases : ssb, OG1RF_10008

Description : single-stranded DNA-binding protein [Ensembl]. Single-strand binding protein family [Interproscan].


Gene families : OG_02_0000128 (OrthoFinder) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AEA92695
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AAL00199 spr1395, ssbA Single stranded binding protein [Ensembl]. Single-strand... 0.18 OrthoFinder
AHY40277 CJ8421_05325 single-stranded DNA-binding protein [Ensembl].... 0.15 OrthoFinder
AKI48021 ssb-1, L2625_00046 single-strand binding protein [Ensembl]. Primosome... 0.09 OrthoFinder
AKP15939 ssb, WX61_01909 Single-stranded DNA-binding protein [Ensembl].... 0.03 OrthoFinder
CBI65792 ssb, HPB8_235 single-strand DNA-binding protein [Ensembl].... 0.11 OrthoFinder
CCG26823 No alias Single-stranded DNA-binding protein [Ensembl].... 0.07 OrthoFinder
CCL20148 ssb, BN171_3710002 Single-stranded DNA-binding protein (Helix-destabilizing... 0.12 OrthoFinder
CPC89742 ssb_1, ERS093114_01561 single-stranded DNA-binding protein [Ensembl].... 0.19 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006026 aminoglycan catabolic process IEP Enrichment
BP GO:0006027 glycosaminoglycan catabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009253 peptidoglycan catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000424 Primosome_PriB/ssb 2 103
No external refs found!