CRO25430 (ygdH)


Aliases : ygdH

Description : LOG family protein YgdH [Ensembl]. Possible lysine decarboxylase, Domain of unknown function (DUF3412), Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases [Interproscan].


Gene families : OG_02_0002367 (OrthoFinder) Phylogenetic Tree(s): OG0002367_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRO25430
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AAL21848 STM2969, ygdH putative nucleotide binding [Ensembl]. Possible lysine... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR031100 LOG_fam 192 331
IPR027820 YgdH_N 10 115
IPR021826 DUF3412 336 456