CRO43057 (dmlR_15)

Aliases : dmlR_15

Description : D-malate degradation protein R [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].

Gene families : OG_02_0000007 (OrthoFinder) Phylogenetic Tree(s): OG0000007_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRO43057
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
AGT22104	N559_0282	putative LysR-family transcriptional regulator...	0.03	OrthoFinder
AGT22561	N559_0770	LysR family transcriptional regulator [Ensembl]. LysR...	0.03	OrthoFinder
AGT23560	N559_1826	LysR family transcriptional regulator [Ensembl]. LysR...	0.02	OrthoFinder
AGT24225	N559_2543	LysR family transcriptional regulator [Ensembl]. LysR...	0.03	OrthoFinder
AGT24568	N559_2901	LysR family transcriptional regulator [Ensembl]. LysR...	0.03	OrthoFinder
CRN86190	dmlR_3	D-malate degradation protein R [Ensembl]. LysR substrate...	0.05	OrthoFinder
CRO42652	dmlR_14	D-malate degradation protein R [Ensembl]. LysR substrate...	0.08	OrthoFinder
CRP37683	dmlR_29	D-malate degradation protein R [Ensembl]. LysR substrate...	0.04	OrthoFinder
CRP53621	dmlR_30	D-malate degradation protein R [Ensembl]. LysR substrate...	0.08	OrthoFinder
KNA59855	VCV51_032266	LysR substrate binding domain-containing protein...	0.03	OrthoFinder
KNA59858	VCV51_032269	LysR substrate binding domain-containing protein...	0.02	OrthoFinder
KNA60706	VCV51_032145	LysR substrate binding domain-containing protein...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Enrichment
MF	GO:0004222	metalloendopeptidase activity	IEP	Enrichment
BP	GO:0007165	signal transduction	IEP	Enrichment
MF	GO:0008237	metallopeptidase activity	IEP	Enrichment
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005119	LysR_subst-bd	92	298
IPR000847	Tscrpt_reg_HTH_LysR	12	67

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_02400

CRO43057 (dmlR_15)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation