CRO57592 (rpmE)

Aliases : rpmE

Description : 50S ribosomal protein L31 [Ensembl]. Ribosomal protein L31 [Interproscan].

Gene families : OG_02_0000170 (OrthoFinder) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRO57592
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
AAC76918	rpmE, b3936	50S ribosomal subunit protein L31 [Ensembl]. Ribosomal...	0.16	OrthoFinder
AAK99980	spr1177, rpmE	50S ribosomal protein L31 [Ensembl]. Ribosomal protein...	0.05	OrthoFinder
AAL22936	STM4096, rpmE	50S ribosomal subunit protein L31 [Ensembl]. Ribosomal...	0.18	OrthoFinder
AEA93635	rpmE, OG1RF_10948	50S ribosomal protein L31 [Ensembl]. Ribosomal protein...	0.05	OrthoFinder
AGT26625	N559_5048	50S ribosomal protein L31 [Ensembl].	0.04	OrthoFinder
AHY39427	rpmE, CJ8421_00790	50S ribosomal protein L31 [Ensembl]. Ribosomal protein...	0.03	OrthoFinder
AKI50478	rpmE, L2625_02668	ribosomal protein L31 [Ensembl]. Ribosomal protein L31...	0.04	OrthoFinder
AKP15272	rpmE, WX61_01223	50S ribosomal protein L31 [Ensembl]. Ribosomal protein...	0.03	OrthoFinder
CCG27118	No alias	LSU ribosomal protein L31p [Ensembl]. Ribosomal protein...	0.13	OrthoFinder
CCL19956	rpmE, BN171_3600034	50S ribosomal protein L31 [Ensembl]. Ribosomal protein...	0.05	OrthoFinder
CPD24869	rpmE2, ERS093114_02385	50S ribosomal protein L31 type B [Ensembl]. Ribosomal...	0.14	OrthoFinder
EDJ91333	CGSHi22421_04498	50S ribosomal protein L31 [Ensembl]. Ribosomal protein...	0.09	OrthoFinder
KNA54898	VCV51_031796	ribosomal protein L31 [Ensembl]. Ribosomal protein L31...	0.06	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003743	translation initiation factor activity	IEP	Enrichment
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Enrichment
BP	GO:0006351	transcription, DNA-templated	IEP	Enrichment
BP	GO:0006413	translational initiation	IEP	Enrichment
BP	GO:0006754	ATP biosynthetic process	IEP	Enrichment
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Enrichment
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	Enrichment
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Enrichment
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	Enrichment
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Enrichment
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	Enrichment
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Enrichment
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	Enrichment
BP	GO:0009403	toxin biosynthetic process	IEP	Enrichment
BP	GO:0009404	toxin metabolic process	IEP	Enrichment
CC	GO:0015934	large ribosomal subunit	IEP	Enrichment
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Enrichment
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Enrichment
BP	GO:0019748	secondary metabolic process	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
BP	GO:0032784	regulation of DNA-templated transcription, elongation	IEP	Enrichment
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Enrichment
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Enrichment
CC	GO:0044391	ribosomal subunit	IEP	Enrichment
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Enrichment
BP	GO:0097659	nucleic acid-templated transcription	IEP	Enrichment
MF	GO:0097747	RNA polymerase activity	IEP	Enrichment
CC	GO:1990904	ribonucleoprotein complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002150	Ribosomal_L31	1	65

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_02846

CRO57592 (rpmE)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation