CRO70395 (pchR_1)

Aliases : pchR_1

Description : Regulatory protein PchR [Ensembl]. Helix-turn-helix domain [Interproscan].

Gene families : OG_02_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CRO70395
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AGT24051 N559_2350 putative AraC-type trancriptional regulator [Ensembl].... 0.03 OrthoFinder
AKI48081 L2625_00107 transcriptional regulator, AraC family [Ensembl].... 0.02 OrthoFinder
CCL18283 BN171_220035 Transcriptional regulator, AraC family [Ensembl].... 0.02 OrthoFinder
CCL19667 BN171_3370001 Transcriptional regulator, AraC family [Ensembl].... 0.02 OrthoFinder
KNA58949 VCV51_031249 AraC family Bacterial regulatory helix-turn-helix... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0050380 undecaprenyl-diphosphatase activity IEP Enrichment
InterPro domains Description Start Stop
IPR018060 HTH_AraC 238 312