CRO77684 (dmlR_21)

Aliases : dmlR_21

Description : D-malate degradation protein R [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].

Gene families : OG_02_0000007 (OrthoFinder) Phylogenetic Tree(s): OG0000007_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRO77684
Cluster	HCCA: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method	Actions
AAL19887	STM0952	putative transcriptional regulator, lysR family...	0.02	OrthoFinder
AAL20594	STM1677	putative LysR family transcriptional regulator...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001897	cytolysis by symbiont of host cells	IEP	Enrichment
BP	GO:0001906	cell killing	IEP	Enrichment
BP	GO:0001907	killing by symbiont of host cells	IEP	Enrichment
MF	GO:0004602	glutathione peroxidase activity	IEP	Enrichment
BP	GO:0006979	response to oxidative stress	IEP	Enrichment
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Enrichment
MF	GO:0008830	dTDP-4-dehydrorhamnose 3,5-epimerase activity	IEP	Enrichment
MF	GO:0015562	efflux transmembrane transporter activity	IEP	Enrichment
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Enrichment
MF	GO:0016854	racemase and epimerase activity	IEP	Enrichment
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Enrichment
BP	GO:0019835	cytolysis	IEP	Enrichment
BP	GO:0019836	hemolysis by symbiont of host erythrocytes	IEP	Enrichment
BP	GO:0030258	lipid modification	IEP	Enrichment
BP	GO:0030259	lipid glycosylation	IEP	Enrichment
BP	GO:0031640	killing of cells of other organism	IEP	Enrichment
BP	GO:0044179	hemolysis in other organism	IEP	Enrichment
BP	GO:0044403	biological process involved in symbiotic interaction	IEP	Enrichment
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	Enrichment
BP	GO:0051701	biological process involved in interaction with host	IEP	Enrichment
BP	GO:0051715	cytolysis in other organism	IEP	Enrichment
BP	GO:0051801	cytolysis in other organism involved in symbiotic interaction	IEP	Enrichment
BP	GO:0051883	killing of cells in other organism involved in symbiotic interaction	IEP	Enrichment
BP	GO:0052331	hemolysis in other organism involved in symbiotic interaction	IEP	Enrichment
BP	GO:0070085	glycosylation	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005119	LysR_subst-bd	88	293
IPR000847	Tscrpt_reg_HTH_LysR	5	63

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_03411

CRO77684 (dmlR_21)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation